Stem-loop sequence xtr-mir-363

Accession

MI0004955 (change log)

Description

Xenopus tropicalis miR-363 stem-loop

Gene family

MIPF0000138; mir-363

Stem-loop

   u     u   cg         ca  a         a   aguu 
5'  uuugu guu  cggguggau  cg ugcaauuuu uuu    u
    ||||| |||  |||||||||  || ||||||||| |||     
3'  agacg caa  gucuaccua  gc acguuaaaa gag    g
   a     c   au         ug  -         a   gaug 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3): chr8: 47197557-47197643 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from xtr-mir-363

• xtr-mir-106: chr8: 47198219-47198281 [-]
• xtr-mir-18b: chr8: 47198092-47198169 [-]
• xtr-mir-20b: chr8: 47197934-47198007 [-]
• xtr-mir-19b-1: chr8: 47197821-47197893 [-]
• xtr-mir-92a-2: chr8: 47197691-47197763 [-]
• xtr-mir-363: chr8: 47197557-47197643 [-]

Database links

• miRBase Tracker:MI0004955

Mature sequence xtr-miR-363-5p

• Accession: MIMAT0003701
• Sequence: 13 - cggguggaucacgaugcaauuu - 34
• Evidence: by similarity; MI0003553
• Predicted targets:
  • TargetScanVert:xtr-miR-363-5p

Mature sequence xtr-miR-363-3p

• Accession: MIMAT0003702
• Sequence: 56 - aauugcacgguauccaucugu - 76
• Evidence: by similarity; MI0003553
• Predicted targets:
  • TargetScanVert:xtr-miR-363-3p