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miRBase |
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Stem-loop sequence mml-mir-200a |
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Accession | MI0007663 (change log) | |||||
Description | Macaca mulatta miR-200a stem-loop | |||||
Gene family | MIPF0000019; mir-8 | |||||
Literature search |
2 open access papers mention mml-mir-200a | |||||
Stem-loop |
cc - c g - ----------- a 5' ggg c ccu ugagcauc uuaccggacagu gcugg u ||| | ||| |||||||| |||||||||||| ||||| u 3' ccc g gga acuuguag aauggucuguca cgacc u ca a u a c caaucucaguu c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mml-miR-200a-5p |
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Accession | MIMAT0026842 |
Sequence |
16 - caucuuaccggacagugcugga - 37 |
Deep sequencing | 938 reads, 7 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence mml-miR-200a-3p |
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Accession | MIMAT0006233 |
Sequence |
54 - uaacacugucugguaacgaugu - 75 |
Deep sequencing | 78800 reads, 9 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:18186931
"Identification of novel homologous microRNA genes in the rhesus macaque genome"
BMC Genomics. 9:8(2008).
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2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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