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miRBase |
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Stem-loop sequence oan-mir-200a |
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Accession | MI0006744 (change log) | |||||||
Description | Ornithorhynchus anatinus miR-200a stem-loop | |||||||
Gene family | MIPF0000019; mir-8 | |||||||
Stem-loop |
gugccaacug - g - c uu 5' gcuug ugguccu cc ugggcauc uuacuagacagug ugga uggg ||||| ||||||| || |||||||| ||||||||||||| |||| ||| a 3' cgagc accagga gg acuuguag aauggucugucac aucu aucu --aucuccua a a c a -c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence oan-miR-200a-5p |
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Accession | MIMAT0006935 |
Previous IDs | oan-miR-200a* |
Sequence |
30 - caucuuacuagacagugcugga - 51 |
Deep sequencing | 456 reads, 3 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence oan-miR-200a-3p |
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Accession | MIMAT0006936 |
Previous IDs | oan-miR-200a |
Sequence |
66 - uaacacugucugguaacgauguu - 88 |
Deep sequencing | 11185 reads, 5 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:18463306
"Conservation of small RNA pathways in platypus"
Genome Res. 18:995-1004(2008).
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