Stem-loop sequence dps-mir-2562

Accession

MI0011706 (change log)

Description

Drosophila pseudoobscura miR-2562 stem-loop

Stem-loop

   --         --u     -uauu   c  -  u 
5'   gcaagucaa   aagau     cca au ca u
     |||||||||   |||||     ||| || ||  
3'   cguuuaguu   uucua     ggu ua gu a
   ga         cac     caauu   a  u  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group4: 697493-697556 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011706

Mature sequence dps-miR-2562-5p

• Accession: MIMAT0012386
• Previous IDs: dps-miR-2562*
• Sequence: 1 - gcaagucaauaagauuauuc - 20
• Evidence: experimental; Illumina [1]

Mature sequence dps-miR-2562-3p

• Accession: MIMAT0012387
• Previous IDs: dps-miR-2562
• Sequence: 41 - uuaacaucuucacuugauuugcag - 64
• Evidence: experimental; Illumina [1]

References

1. PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).