Stem-loop sequence dsi-mir-999

Accession

MI0011746 (change log)

Description

Drosophila simulans miR-999 stem-loop

Gene family

MIPF0000852; mir-999

Stem-loop

     a  cc   --        cc         g      g       u  au 
5' gg ug  gcu  caauuacc  gacauaguc uacggu aauguug gu  u
   || ||  |||  ||||||||  ||||||||| |||||| ||||||| ||  g
3' cc ac  cga  guuggugg  cugugucag auguca uuguaac ca  g
     g  -c   cc        cu         a      a       -  ga 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (dsim_caf1; GCA_000259055.1): chr3R: 17429603-17429703 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0011746

Mature sequence dsi-miR-999-5p

• Accession: MIMAT0012455
• Previous IDs: dsi-miR-999*
• Sequence: 22 - acauagucguacggugaauguug - 44
• Evidence: experimental; Illumina [1]

Mature sequence dsi-miR-999-3p

• Accession: MIMAT0012456
• Previous IDs: dsi-miR-999
• Sequence: 60 - uguuaacuguaagacugugucu - 81
• Evidence: experimental; Illumina [1]

References

1. PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).