Stem-loop sequence cbn-mir-235

Accession

MI0024941 (change log)

Description

Caenorhabditis brenneri miR-235 stem-loop

Stem-loop

   --     cu   u  c    u     -  ucaacg 
5'   agguc  ggc ga ugca auauu gc      u
     |||||  ||| || |||| ||||| ||      u
3'   uccgg  ccg cu acgu uauaa cg      a
   ag     cc   -  c    -     u  uaagaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (C_brenneri-6.0.1b; GCA_000143925.2): Cbre_Contig98: 204892-204959 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0024941

Mature sequence cbn-miR-235

• Accession: MIMAT0029757
• Sequence: 47 - uauugcacucgccccggccuga - 68
• Evidence: experimental; Illumina [1]

References

1. PMID:23363624 "High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes" Shi Z, Montgomery TA, Qi Y, Ruvkun G Genome Res. 23:497-508(2013).