Stem-loop sequence gra-MIR8762d

Accession

MI0027809 (change log)

Description

Gossypium raimondii miR8762d stem-loop

Gene family

MIPF0001859; MIR8762

Stem-loop

   -       gaa            a                   -auu  -   g         auugauuuuuuacaauuuuaaaaaauuguaaaaauucuuucuaaaaaauaaaaaaaa 
5'  aaguuaa   uuguuaacuuug ugauguggcauauaugugg    uc cau uggcaauua                                                         u
    |||||||   |||||||||||| |||||||||||||||||||    || ||| |||||||||                                                         a
3'  uucaauu   aacaauugaaac acuguacugugugugcacc    ag gua aucguuaau                                                         g
   c       aaa            g                   gaac  c   -         caauaaaaaauuuuugaaauuuuauaauuuuuuuaauauagaaacuauuagaaaauu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Graimondii2_0; GCA_000327365.1): chr8: 53253449-53253687 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0027809

Mature sequence gra-miR8762d

• Accession: MIMAT0034214
• Sequence: 11 - uuguuaacuuugaugauguggcau - 34
• Evidence: experimental; Illumina [1]

References

1. PMID:24044642 "Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells" Xue W, Wang Z, Du M, Liu Y, Liu JY BMC Genomics. 14:629(2013).