Stem-loop sequence eca-mir-8966

AccessionMI0028120 (change log)
DescriptionEquus caballus miR-8966 stem-loop
Stem-loop
   -cu      ---         g uaucuuu    a  uu  -  aa   a   uu   cuu  a   -    
5'    ggguuu   cagccuugg g       ugga gc  gg ga  gca gag  ggg   uc ccc ccu 
      ||||||   ||||||||| |       |||| ||  || ||  ||| |||  |||   || ||| || a
3'    cucgag   gucggaacc u       accu cg  cc cu  cgu cuc  ccc   ag ggg gga 
   acc      ucc         g -------    -  uu  u  cc   -   -u   ---  -   a    
Get sequence
Deep sequencing
4 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (EquCab2.0; GCF_000002305.2) Overlapping transcripts
chr22: 20479829-20479951 [-]
intergenic
Database links

Mature sequence eca-miR-8966

Accession MIMAT0034501
Sequence

70 - 

aggggacccucucugcccu

 - 88

Get sequence
Deep sequencing1 reads, 1 experiments
Evidence experimental; Illumina [1]

References

1
PMID:24692655 "Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats" Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA Mol Biol Evol. 31:1536-1545(2014).