Stem-loop sequence oha-mir-142

Accession

MI0031355 (change log)

Description

Ophiophagus hannah miR-142 stem-loop

Gene family

MIPF0000084; mir-142

Stem-loop

   -uaugg      g                 a         uaaac     u 
5'       acagug acucauccauaaaguag aagcacuac     gcuug g
         |||||| ||||||||||||||||| |||||||||     |||||  
3'       ugucau ugaguagguauuucauc uuugugaug     ugaac u
   aacgag      g                 c         -----     c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (OphHan1.0; GCA_000516915.1): AZIM01001308.1: 316277-316374 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0031355

Mature sequence oha-miR-142-5p

• Accession: MIMAT0036721
• Sequence: 20 - cauaaaguagaaagcacuacua - 41
• Evidence: not experimental

Mature sequence oha-miR-142-3p

• Accession: MIMAT0036722
• Sequence: 58 - uguaguguuuccuacuuuaugga - 80
• Evidence: not experimental

References

1. PMID:24297900 "The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system" Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl Proc Natl Acad Sci U S A. 110:20651-20656(2013).