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Branchiostoma floridae miRNAs (156 sequences)
ID
Accession
RPM
Chromosome
Start
End
Strand
Fetch
bfl-let-7a-1
MI0010516
4.61e+04
Bf_V2_28
2706001
2706082
+
bfl-let-7a-2
MI0010007
4.62e+04
Bf_V2_28
2707847
2707945
+
bfl-let-7b
MI0010517
-
Bf_V2_28
2706003
2706084
-
bfl-mir-1
MI0010008
7.55e+03
Bf_V2_185
1444175
1444270
+
bfl-mir-7
MI0010009
1.33e+03
Bf_V2_119
1621042
1621123
-
bfl-mir-9-1
MI0010520
4.52e+03
Bf_V2_195
400332
400413
+
bfl-mir-9-2
MI0010521
4.52e+03
Bf_V2_430
38051
38132
+
bfl-mir-10a
MI0010011
1.09e+04
Bf_V2_12
933243
933318
+
bfl-mir-10b
MI0010012
4.8e+03
Bf_V2_12
882996
883096
+
bfl-mir-10c
MI0010013
2.15e+03
Bf_V2_12
795184
795261
+
bfl-mir-19
MI0010526
-
Bf_V2_167
3476282
3476363
-
bfl-mir-22
MI0010014
2.31e+04
Bf_V2_18
2394933
2395017
+
bfl-mir-29a
MI0010015
1.06e+05
bfl-mir-29b
MI0010016
1.47e+03
bfl-mir-31
MI0010017
3.12e+04
Bf_V2_278
268453
268553
-
bfl-mir-33-1
MI0010525
321
Bf_V2_21
4947531
4947612
-
bfl-mir-33-2
MI0010018
261
Bf_V2_21
4947944
4948030
-
bfl-mir-34a
MI0010019
2.17e+03
Bf_V2_269
1087742
1087842
-
bfl-mir-34b
MI0010512
5.12e+04
Bf_V2_38
2117606
2117687
-
bfl-mir-34c-1
MI0017635
603
Bf_V2_269
1088499
1088590
-
bfl-mir-34c-2
MI0023543
-
Bf_V2_288
335461
335552
+
bfl-mir-34d
MI0017678
20.1
Bf_V2_269
1086839
1086926
-
bfl-mir-34e
MI0017679
20.1
Bf_V2_288
337119
337206
+
bfl-mir-71
MI0010020
2.43e+03
Bf_V2_187
5824839
5824939
-
bfl-mir-92a-1
MI0010022
4.7e+03
Bf_V2_216
777177
777277
-
bfl-mir-92a-2
MI0010522
4.84e+03
Bf_V2_216
774437
774518
-
bfl-mir-92a-3
MI0010523
4.84e+03
Bf_V2_216
776303
776384
-
bfl-mir-92b
MI0010023
3.51e+04
Bf_V2_106
372710
372810
+
bfl-mir-92c
MI0010524
542
Bf_V2_106
372242
372441
+
bfl-mir-92d
MI0017606
-
Bf_V2_165
210790
210872
+
bfl-mir-96
MI0010024
844
Bf_V2_186
1109798
1109898
+
bfl-mir-100
MI0010025
3.21e+04
Bf_V2_28
2705733
2705832
+
bfl-mir-124
MI0010026
341
Bf_V2_32
1879911
1880011
+
bfl-mir-125a
MI0010027
7.5e+04
Bf_V2_28
2707548
2707648
+
bfl-mir-125b
MI0010518
-
Bf_V2_28
2707563
2707644
-
bfl-mir-129a
MI0010519
60.3
Bf_V2_39
4848645
4848726
+
bfl-mir-129b
MI0017607
20.1
Bf_V2_23
670485
670572
+
bfl-mir-133
MI0010028
8.01e+04
bfl-mir-135a-1
MI0010501
1.35e+04
Bf_V2_158
3847395
3847476
-
bfl-mir-135a-2
MI0010502
1.35e+04
Bf_V2_158
3848762
3848843
-
bfl-mir-135b-1
MI0010689
281
Bf_V2_158
3847619
3847690
-
bfl-mir-135b-2
MI0015994
281
Bf_V2_158
3848991
3849062
-
bfl-mir-137
MI0010029
824
Bf_V2_114
165535
165635
-
bfl-mir-153
MI0022168
-
Bf_V2_242
768182
768266
+
bfl-mir-182a
MI0010030
121
Bf_V2_369
120315
120415
-
bfl-mir-182b
MI0017608
100
Bf_V2_369
120014
120113
-
bfl-mir-182c
MI0017661
80.4
bfl-mir-182d
MI0017666
40.2
Bf_V2_196
2749692
2749790
+
bfl-mir-183
MI0010031
542
Bf_V2_186
1108717
1108817
+
bfl-mir-184
MI0010032
3.08e+04
Bf_V2_163
176162
176262
-
bfl-mir-190
MI0010033
2.67e+03
Bf_V2_201
1087898
1087998
-
bfl-mir-193a
MI0010034
40.2
Bf_V2_23
3615151
3615226
-
bfl-mir-193b
MI0017628
763
Bf_V2_36
4032844
4032921
-
bfl-mir-200a
MI0010035
6.03e+03
Bf_V2_211
361501
361601
-
bfl-mir-200b
MI0010036
2.89e+03
Bf_V2_211
355968
356065
-
bfl-mir-200c
MI0010037
1.23e+03
Bf_V2_211
358765
358859
-
bfl-mir-210
MI0010038
8.4e+03
Bf_V2_39
678318
678418
-
bfl-mir-216
MI0010039
141
Bf_V2_29
961712
961786
-
bfl-mir-217
MI0010040
8.72e+03
Bf_V2_29
960802
960869
-
bfl-mir-219
MI0010527
60.3
Bf_V2_250
1137875
1137956
+
bfl-mir-242
MI0010041
20.1
Bf_V2_117
716462
716547
+
bfl-mir-252a
MI0010042
4.48e+03
Bf_V2_101
1038954
1039054
+
bfl-mir-252b
MI0010043
522
Bf_V2_101
1038237
1038337
+
bfl-mir-278
MI0010639
603
Bf_V2_6
3266615
3266696
-
bfl-mir-281
MI0010044
6.51e+03
Bf_V2_151
904339
904423
+
bfl-mir-375
MI0010045
442
Bf_V2_285
289785
289885
-
bfl-mir-705
MI0010528
-
Bf_V2_21
5947325
5947406
-
bfl-mir-2013
MI0010500
4.7e+04
Bf_V2_13
1075339
1075420
+
bfl-mir-2056
MI0010491
723
Bf_V2_6
3510457
3510538
+
bfl-mir-2057
MI0010492
1.78e+04
Bf_V2_93
856161
856242
+
bfl-mir-2058
MI0010493
1.34e+04
Bf_V2_93
857171
857252
+
bfl-mir-2059
MI0010494
20.1
Bf_V2_109
1619205
1619286
+
bfl-mir-2060
MI0010495
-
Bf_V2_98
3322462
3322543
-
bfl-mir-2061
MI0010496
1.13e+04
Bf_V2_187
5550948
5551029
-
bfl-mir-2062
MI0010497
3.25e+04
Bf_V2_166
2072211
2072292
-
bfl-mir-2063
MI0010498
80.4
Bf_V2_223
848285
848366
-
bfl-mir-2064
MI0010499
100
Bf_V2_13
1079951
1080032
+
bfl-mir-2065
MI0010503
40.2
bfl-mir-2066
MI0010504
6.57e+03
Bf_V2_32
2941419
2941500
-
bfl-mir-2067
MI0010505
3.19e+03
Bf_V2_32
2938954
2939035
-
bfl-mir-2068
MI0010506
301
Bf_V2_32
1589821
1589902
-
bfl-mir-2069
MI0010507
-
Bf_V2_21
5880019
5880100
+
bfl-mir-2070
MI0010508
824
Bf_V2_147
2113632
2113713
-
bfl-mir-2071
MI0010509
1.87e+03
Bf_V2_39
891953
892033
-
bfl-mir-2072
MI0010510
1.45e+04
Bf_V2_140
536442
536523
-
bfl-mir-2073
MI0010511
-
Bf_V2_136
2847127
2847208
-
bfl-mir-2075
MI0010514
-
Bf_V2_88
2357121
2357220
+
bfl-mir-2076
MI0010515
3.21e+04
Bf_V2_136
88222
88303
+
bfl-mir-4057-1
MI0017648
60.3
Bf_V2_28
483741
483831
-
bfl-mir-4057-2
MI0023542
-
Bf_V2_28
496726
496816
-
bfl-mir-4856a
MI0017609
1.83e+04
Bf_V2_118
220264
220351
+
bfl-mir-4856b
MI0017617
6.87e+03
Bf_V2_118
219709
219795
+
bfl-mir-4857
MI0017610
-
Bf_V2_118
217921
217998
+
bfl-mir-4858
MI0017611
-
Bf_V2_12
1066919
1066994
-
bfl-mir-4859
MI0017612
6.79e+03
Bf_V2_28
2310455
2310542
+
bfl-mir-4860
MI0017613
6.33e+03
Bf_V2_122
1823456
1823529
-
bfl-mir-4861
MI0017614
201
Bf_V2_187
6715323
6715416
+
bfl-mir-4862
MI0017615
-
Bf_V2_118
218827
218894
+
bfl-mir-4863
MI0017618
-
Bf_V2_140
536779
536871
-
bfl-mir-4864
MI0017619
2.77e+03
Bf_V2_158
1384074
1384154
-
bfl-mir-4865
MI0017620
221
Bf_V2_122
1824327
1824410
-
bfl-mir-4866
MI0017621
1.23e+03
bfl-mir-4867
MI0017622
2.81e+03
Bf_V2_167
1471716
1471788
+
bfl-mir-4868a
MI0017623
4.04e+03
Bf_V2_163
118493
118569
+
bfl-mir-4868b
MI0017624
382
Bf_V2_163
129189
129279
+
bfl-mir-4868c
MI0017625
80.4
Bf_V2_9
709094
709180
-
bfl-mir-4869
MI0017626
1e+03
Bf_V2_118
216744
216826
+
bfl-mir-4870
MI0017627
1.17e+03
Bf_V2_22
1000661
1000750
+
bfl-mir-4871
MI0017629
1.12e+04
Bf_V2_127
1679942
1680014
-
bfl-mir-4872a
MI0017630
141
Bf_V2_258
862903
862990
-
bfl-mir-4872b
MI0017631
60.3
bfl-mir-4872c-1
MI0017632
60.3
Bf_V2_258
876573
876655
-
bfl-mir-4872c-2
MI0017633
60.3
Bf_V2_258
876370
876455
-
bfl-mir-4873
MI0017636
301
Bf_V2_143
758625
758702
-
bfl-mir-4874
MI0017637
-
Bf_V2_186
1687479
1687572
-
bfl-mir-4875a
MI0017638
40.2
Bf_V2_122
1002761
1002841
-
bfl-mir-4875b
MI0017639
-
Bf_V2_99
920655
920729
+
bfl-mir-4875c
MI0017640
20.1
Bf_V2_211
748149
748229
+
bfl-mir-4875d
MI0017641
-
bfl-mir-4876
MI0017642
121
Bf_V2_187
5247732
5247823
+
bfl-mir-4877
MI0017643
201
Bf_V2_243
637270
637356
+
bfl-mir-4878
MI0017644
60.3
Bf_V2_196
6167733
6167805
+
bfl-mir-4879
MI0017645
-
Bf_V2_243
638061
638135
+
bfl-mir-4880
MI0017646
80.4
bfl-mir-4881
MI0017647
80.4
Bf_V2_19
551607
551697
+
bfl-mir-4882a
MI0017649
-
Bf_V2_215
1699928
1700001
+
bfl-mir-4882b
MI0017650
-
Bf_V2_215
1699499
1699583
+
bfl-mir-4882c
MI0017651
-
Bf_V2_215
1699784
1699878
+
bfl-mir-4883
MI0017652
60.3
Bf_V2_65
4833174
4833248
-
bfl-mir-4884
MI0017653
161
Bf_V2_215
1697024
1697098
+
bfl-mir-4885
MI0017654
-
Bf_V2_135
1568601
1568681
+
bfl-mir-4886
MI0017656
40.2
Bf_V2_13
1579022
1579100
+
bfl-mir-4887
MI0017657
20.1
Bf_V2_200
1228471
1228557
-
bfl-mir-4888
MI0017658
60.3
Bf_V2_162
2480055
2480127
-
bfl-mir-4889a
MI0017659
40.2
Bf_V2_66
376033
376132
+
bfl-mir-4889b
MI0017660
60.3
Bf_V2_1
2620120
2620203
+
bfl-mir-4890
MI0017662
40.2
Bf_V2_187
5823503
5823593
-
bfl-mir-4891
MI0017663
40.2
Bf_V2_195
901456
901543
-
bfl-mir-4892
MI0017664
-
Bf_V2_48
6830123
6830217
-
bfl-mir-4893
MI0017665
40.2
Bf_V2_172
771854
771942
-
bfl-mir-4894
MI0017667
20.1
Bf_V2_258
862728
862820
-
bfl-mir-4895
MI0017668
20.1
bfl-mir-4897
MI0017670
-
Bf_V2_195
553230
553315
-
bfl-mir-4898
MI0017672
-
Bf_V2_185
1009862
1009948
-
bfl-mir-4899
MI0017673
-
Bf_V2_18
2257214
2257299
+
bfl-mir-4900a-1
MI0017674
20.1
Bf_V2_18
2410817
2410890
+
bfl-mir-4900a-2
MI0023544
-
Bf_V2_18
2419551
2419624
+
bfl-mir-4900b-1
MI0017675
20.1
Bf_V2_18
2410560
2410648
+
bfl-mir-4900b-2
MI0023545
-
Bf_V2_18
2419298
2419386
+
bfl-mir-4901
MI0017676
-
Bf_V2_32
2164035
2164116
+
bfl-mir-4902
MI0017677
-
Bf_V2_96
2034809
2034896
-
bfl-mir-4903
MI0017680
20.1
Bf_V2_304
111514
111602
+
bfl-mir-4904
MI0017681
-
Bf_V2_246
974636
974714
+
bfl-mir-4905
MI0017682
-
Bf_V2_187
3650297
3650372
-
bfl-mir-4906
MI0017683
20.1
Bf_V2_309
282394
282471
+
bfl-mir-4928
MI0017634
221
Bf_V2_14
956795
956873
-
Get selected sequences:
Stem-loop sequence
Mature sequence
Select sequences and output type, then click "Fetch Sequences":
Unaligned fasta format
ClustalW alignment