Ciona intestinalis miRNAs (348 sequences) [JGI2]

IDAccessionRPMChromosomeStartEndStrandConfidenceFetch
cin-let-7a-1MI00071492.5e+034q
2082260
2082369
+
undefined
cin-let-7a-2MI00071502.5e+034q
2083177
2083286
+
undefined
cin-let-7bMI00071514.6e+034q
2082788
2082896
+
cin-let-7cMI00071521e+034q
2082979
2083088
+
undefined
cin-let-7dMI000715345010p
1217625
1217725
-
undefined
cin-let-7eMI0007154350undefined
cin-let-7fMI00157771.2e+034q
2082406
2082478
+
undefined
cin-mir-1MI00154804e+031q
5268751
5268845
-
undefined
cin-mir-7MI00071551001p
1774516
1774593
-
undefined
cin-mir-9MI0015482-5q
5965526
5965579
-
undefined
cin-mir-15MI00154832507q
4571603
4571655
-
undefined
cin-mir-29MI0015485-12q
3181737
3181795
+
undefined
cin-mir-31MI00071561005q
2076043
2076144
+
undefined
cin-mir-33MI0007157-undefined
cin-mir-34MI000715860010q
2152513
2152631
-
undefined
cin-mir-78MI0007159-2q
8003792
8003890
+
undefined
cin-mir-92aMI00071607503p
1864426
1864526
+
cin-mir-92bMI00071617501p
2635676
2635776
-
cin-mir-92cMI00071627503p
1865219
1865319
+
cin-mir-92dMI00154962503p
1864796
1864851
+
undefined
cin-mir-92eMI00154953501p
1p
2628718
2635396
2628769
2635447
-
-
cin-mir-96MI001548650scaffold_36
550854
550906
+
undefined
cin-mir-101MI0007163-undefined
cin-mir-124-1MI00071643.65e+047q
6301475
6301551
+
cin-mir-124-2MI00071653.66e+047q
6301598
6301696
+
cin-mir-125MI001548710010p
1217517
1217565
-
undefined
cin-mir-126MI0007166501q
1582551
1582631
+
undefined
cin-mir-132-2MI0015497-scaffold_92
102853
102909
-
undefined
cin-mir-133MI00071671.85e+031q
5268510
5268610
-
cin-mir-135MI0015489-scaffold_92
102409
102465
-
undefined
cin-mir-141MI00071682.75e+03scaffold_71
128547
128621
+
cin-mir-153MI00071692.05e+035q
1421653
1421754
+
undefined
cin-mir-155MI0007170-4q
2177777
2177877
-
undefined
cin-mir-181MI0007171-3q
1843689
1843802
+
undefined
cin-mir-182MI0015490150scaffold_36
551325
551387
+
undefined
cin-mir-183MI0007172-scaffold_36
549852
549931
+
undefined
cin-mir-184MI000717350undefined
cin-mir-196MI00154911007q
scaffold_1876
3938170
7632
3938222
7684
-
+
undefined
cin-mir-199MI0007174-undefined
cin-mir-200MI00071751.25e+03scaffold_71
128174
128259
+
cin-mir-216MI0007176200undefined
cin-mir-217MI00071772.85e+03
cin-mir-219MI00071781.3e+037q
5634284
5634385
+
cin-mir-281MI0007179-scaffold_64
295962
296062
-
undefined
cin-mir-367MI00154925501q
1q
scaffold_368
161118
166124
39820
161173
166179
39875
-
-
+
undefined
cin-mir-375MI0015493-7q
439603
439685
+
undefined
cin-mir-672MI0007180-undefined
cin-mir-1473MI00071295010p
1218098
1218177
-
undefined
cin-mir-1497MI00071301.04e+059q
3479361
3479464
+
cin-mir-1502aMI00155411.55e+043p
1538791
1538849
+
cin-mir-1502bMI00155421.22e+043p
1538677
1538733
+
undefined
cin-mir-1502cMI00155431.76e+043p
1540568
1540624
+
cin-mir-1502dMI00155442.1e+043p
1538443
1538501
+
undefined
cin-mir-3575MI0015481-scaffold_71
128186
128245
-
undefined
cin-mir-3598MI00154844.4e+0314q
1335804
1335860
+
undefined
cin-mir-3599MI0015488250scaffold_67
145805
145853
-
undefined
cin-mir-4000a-1MI00155006.75e+037q
5398797
5398851
-
undefined
cin-mir-4000a-2MI00155047.25e+037q
5410807
5410861
-
cin-mir-4000b-1MI00155014.36e+047q
5401203
5401256
-
undefined
cin-mir-4000b-2MI00155084.18e+047q
5401574
5401625
-
undefined
cin-mir-4000cMI00154981.36e+047q
5402053
5402104
-
undefined
cin-mir-4000dMI00154993.84e+047q
5400845
5400896
-
undefined
cin-mir-4000eMI00155028.85e+033p
1538091
1538174
+
cin-mir-4000fMI00155057.1e+033p
1538921
1538971
+
cin-mir-4000gMI00155061.2e+047q
5412928
5412977
-
undefined
cin-mir-4000hMI00155071.72e+047q
5412693
5412744
-
undefined
cin-mir-4000iMI00155097.3e+037q
5413395
5413447
-
undefined
cin-mir-4001a-1MI00155104.4e+037q
7q
7q
5401442
5402621
5411814
5401493
5402672
5411865
-
-
-
undefined
cin-mir-4001a-2MI00155134.4e+037q
7q
5401049
5411381
5401099
5411431
-
-
undefined
cin-mir-4001b-1MI00155191.95e+037q
5412482
5412542
-
undefined
cin-mir-4001b-2MI00155211.95e+037q
5413505
5413555
-
undefined
cin-mir-4001cMI00155143.06e+043p
1538302
1538360
+
cin-mir-4001dMI00155153.65e+037q
5413021
5413079
-
undefined
cin-mir-4001eMI00155163.85e+037q
5413168
5413216
-
undefined
cin-mir-4001fMI00155172.01e+043p
1537068
1537166
+
cin-mir-4001gMI00155181009q
scaffold_1259
3696828
329
3696896
397
+
+
undefined
cin-mir-4001hMI00155205.3e+037q
7q
5400692
5411022
5400741
5411071
-
-
undefined
cin-mir-4001iMI00155117.86e+043p
1539042
1539094
+
undefined
cin-mir-4002MI0015512-7q
7q
5401048
5411380
5401100
5411432
+
+
undefined
cin-mir-4003a-1MI0015522507q
6152459
6152516
-
undefined
cin-mir-4003a-2MI0015525507q
6168087
6168146
-
undefined
cin-mir-4003a-3MI0015526507q
6168261
6168320
-
undefined
cin-mir-4003a-4MI0015528507q
6150122
6150179
-
undefined
cin-mir-4003bMI0015529507q
6154672
6154730
-
undefined
cin-mir-4003cMI0015524-7q
6151685
6151739
-
undefined
cin-mir-4003dMI0015678-7q
6148874
6148927
-
undefined
cin-mir-4004MI0015530-1q
7635858
7635909
-
undefined
cin-mir-4005aMI0015523507q
6166955
6167009
-
undefined
cin-mir-4005bMI0015527507q
6154057
6154110
-
undefined
cin-mir-4005cMI0015741-3q
1937694
1937748
+
undefined
cin-mir-4006a-1MI00155345.89e+047q
7q
5400066
5410360
5400114
5410408
-
-
undefined
cin-mir-4006a-2MI00155365.89e+047q
5410620
5410672
-
undefined
cin-mir-4006a-3MI00155375.89e+047q
7q
5400214
5410518
5400264
5410568
-
-
undefined
cin-mir-4006bMI00155314.19e+047q
7q
5402317
5412601
5402366
5412650
-
-
undefined
cin-mir-4006cMI00155324.46e+047q
5413621
5413671
-
undefined
cin-mir-4006dMI00155331.5e+047q
5413757
5413810
-
cin-mir-4006eMI00155358.95e+037q
7q
7q
5401862
5403043
5412237
5401908
5403089
5412283
-
-
-
undefined
cin-mir-4006fMI00155381.55e+047q
5412796
5412848
-
undefined
cin-mir-4006gMI00155399.7e+037q
5413284
5413333
-
undefined
cin-mir-4007MI0015540-3p
1538791
1538848
-
undefined
cin-mir-4008aMI0015545-10q
2149015
2149074
-
undefined
cin-mir-4008bMI00155465010q
2148360
2148421
-
undefined
cin-mir-4008cMI00155475010q
2148809
2148870
-
undefined
cin-mir-4009aMI0015548501q
scaffold_368
160902
40039
160954
40091
-
+
cin-mir-4009bMI00155491501q
1q
scaffold_368
160807
165807
40135
160858
165858
40186
-
-
+
cin-mir-4009cMI0015550-1q
1q
scaffold_368
161017
166023
39924
161069
166075
39976
-
-
+
undefined
cin-mir-4010MI00155515003q
2402160
2402221
-
undefined
cin-mir-4011aMI00155538.28e+045q
5615210
5615267
+
undefined
cin-mir-4011bMI00155548.2e+03scaffold_89
505109
505164
-
cin-mir-4012-1MI0015555-scaffold_67
367730
367793
-
undefined
cin-mir-4012-2MI0015556-scaffold_67
366261
366319
-
undefined
cin-mir-4013aMI0015557-scaffold_44
845403
845456
+
undefined
cin-mir-4013bMI0015558-scaffold_44
scaffold_4930
799727
3011
799775
3059
+
+
undefined
cin-mir-4014-1MI001555910012q
1671730
1671783
+
undefined
cin-mir-4014-2MI001556010012q
1671438
1671489
+
undefined
cin-mir-4015-1MI0015561150scaffold_806
19622
19671
-
undefined
cin-mir-4015-2MI0015562150scaffold_890
15167
15216
+
undefined
cin-mir-4016-1MI0015563-scaffold_3782
881
963
+
undefined
cin-mir-4016-2MI0015564-9p
306147
306199
-
undefined
cin-mir-4017-1MI00155652001q
826440
826494
-
undefined
cin-mir-4017-2MI0015566200scaffold_837
10328
10382
+
undefined
cin-mir-4018aMI00155685.57e+043p
1538558
1538610
+
undefined
cin-mir-4018bMI00155697.2e+033p
1539164
1539240
+
undefined
cin-mir-4019MI0015567503p
1538558
1538610
-
undefined
cin-mir-4020aMI0015570-undefined
cin-mir-4020bMI0015571-scaffold_197
39348
39411
-
undefined
cin-mir-4021MI0015572-scaffold_89
466265
466321
+
undefined
cin-mir-4022MI0015573-4q
2649121
2649173
-
undefined
cin-mir-4023MI0015574-2q
1011810
1011865
-
undefined
cin-mir-4024MI0015575-4q
scaffold_1418
3219604
6314
3219678
6388
-
+
undefined
cin-mir-4025MI0015576-9p
2209039
2209095
-
undefined
cin-mir-4026MI0015577-scaffold_89
466718
466767
+
undefined
cin-mir-4027MI0015578-undefined
cin-mir-4028MI0015579-scaffold_156
31120
31173
-
undefined
cin-mir-4029MI00155803.9e+0414q
1295076
1295129
+
cin-mir-4030MI00155811.36e+043q
5430401
5430452
-
undefined
cin-mir-4031MI00155823501q
7488678
7488731
+
cin-mir-4032MI00155838.8e+03undefined
cin-mir-4033MI00155841e+031q
scaffold_837
827335
9065
827389
9119
-
+
cin-mir-4034MI00155859.35e+0314q
1335663
1335717
+
undefined
cin-mir-4035MI00155862506q
1459380
1459436
+
undefined
cin-mir-4036MI00155873.4e+03scaffold_279
54553
54604
-
undefined
cin-mir-4037MI00155884e+03scaffold_65
663455
663511
+
undefined
cin-mir-4038MI00155893.6e+031p
2634947
2635001
-
undefined
cin-mir-4039MI00155904.85e+03scaffold_65
663235
663284
+
undefined
cin-mir-4040MI0015591700undefined
cin-mir-4041MI0015592503p
2002875
2002927
+
cin-mir-4042MI0015593-3p
2002875
2002928
-
undefined
cin-mir-4043MI00155945014p
1742286
1742340
+
undefined
cin-mir-4044MI00155952.8e+033p
2003007
2003063
+
cin-mir-4045MI0015596800scaffold_186
59196
59248
-
undefined
cin-mir-4046MI001559725013q
2008717
2008774
-
cin-mir-4047MI0015598501p
5612061
5612113
+
undefined
cin-mir-4048MI001559990013q
1419229
1419285
+
undefined
cin-mir-4049MI00156007505q
3936738
3936807
-
undefined
cin-mir-4050MI00156015505q
3937936
3937991
-
cin-mir-4051MI00156021.5e+03scaffold_215
27698
27749
-
cin-mir-4052MI0015603100scaffold_65
663557
663606
+
undefined
cin-mir-4053MI0015604-scaffold_55
627148
627209
-
undefined
cin-mir-4054MI001560580010q
2148145
2148201
-
undefined
cin-mir-4055MI00156064507q
1173809
1173864
-
undefined
cin-mir-4056MI0015607-5q
863632
863684
-
undefined
cin-mir-4057MI0015608508q
5997632
5997684
+
undefined
cin-mir-4058MI00156091e+03scaffold_7007
781
828
-
undefined
cin-mir-4059MI00156105007q
4571246
4571297
-
undefined
cin-mir-4060MI001561150scaffold_44
426196
426250
-
cin-mir-4061MI0015612100scaffold_65
663351
663400
+
undefined
cin-mir-4062MI0015613505q
1331354
1331416
+
undefined
cin-mir-4063MI0015614-13q
1420250
1420305
+
undefined
cin-mir-4064MI0015615-8q
6232164
6232214
+
undefined
cin-mir-4065MI0015616-1p
5592325
5592395
+
undefined
cin-mir-4066MI0015617-5q
864513
864560
-
undefined
cin-mir-4067MI00156181501p
1929521
1929577
-
undefined
cin-mir-4068MI0015619-5q
1331150
1331215
+
undefined
cin-mir-4069MI0015620-7q
scaffold_1876
3937889
7909
3937945
7965
-
+
undefined
cin-mir-4070MI0015621-5q
864845
864902
-
undefined
cin-mir-4071MI00156221009q
1934609
1934658
+
undefined
cin-mir-4072MI0015623-8q
6232569
6232622
+
undefined
cin-mir-4073MI0015624-13q
2009067
2009118
-
undefined
cin-mir-4074MI001562520010q
635101
635152
-
undefined
cin-mir-4075MI001562620010p
359813
359897
+
undefined
cin-mir-4076MI0015627-1p
5317680
5317735
-
undefined
cin-mir-4077aMI00156283507q
6150979
6151034
-
undefined
cin-mir-4077bMI00156293507q
6155725
6155780
-
undefined
cin-mir-4077cMI00156303507q
6168570
6168624
-
undefined
cin-mir-4077dMI0015656-7q
7q
6153229
6165860
6153284
6165915
-
-
undefined
cin-mir-4078MI001563150scaffold_44
426304
426354
-
undefined
cin-mir-4079MI0015632-7q
1174112
1174161
-
undefined
cin-mir-4080MI0015633-7q
1174112
1174161
+
undefined
cin-mir-4081MI0015634-2q
6481027
6481077
-
undefined
cin-mir-4082MI0015635-2q
6481027
6481076
+
undefined
cin-mir-4083MI0015636-13q
1449505
1449569
+
undefined
cin-mir-4084MI0015637-4q
scaffold_105
6737327
278344
6737399
278416
-
+
undefined
cin-mir-4085MI0015638-5q
863886
863941
-
undefined
cin-mir-4086MI0015639-5q
864977
865032
-
undefined
cin-mir-4087MI0015640-5q
4877813
4877867
-
undefined
cin-mir-4088MI0015641-4q
5112233
5112299
-
undefined
cin-mir-4089MI0015642-1q
5364509
5364572
+
undefined
cin-mir-4090MI0015643-scaffold_156
91454
91526
-
undefined
cin-mir-4091MI0015644-10q
2150745
2150829
-
undefined
cin-mir-4092MI0015645504q
181157
181209
+
undefined
cin-mir-4093MI0015646-1p
4283623
4283689
-
undefined
cin-mir-4094MI0015647-1q
4104185
4104279
+
undefined
cin-mir-4095MI0015648-10p
1800413
1800468
-
undefined
cin-mir-4096MI0015649-undefined
cin-mir-4097MI001565050scaffold_266
51848
51941
-
undefined
cin-mir-4098MI0015651-8q
7236145
7236204
-
undefined
cin-mir-4099MI0015652-scaffold_92
391347
391440
+
undefined
cin-mir-4100MI0015653-7q
5166716
5166768
-
undefined
cin-mir-4101MI0015654-14p
1000821
1000879
-
undefined
cin-mir-4102MI0015655-undefined
cin-mir-4103MI0015657-scaffold_152
133193
133232
+
undefined
cin-mir-4104MI0015658-scaffold_89
477669
477737
-
undefined
cin-mir-4105MI0015659-1q
958107
958167
-
undefined
cin-mir-4106MI0015660-13q
2263000
2263049
-
undefined
cin-mir-4107MI0015661-undefined
cin-mir-4108MI0015662-undefined
cin-mir-4109MI0015663-2q
960375
960444
+
undefined
cin-mir-4110MI0015664-12p
883048
883107
+
undefined
cin-mir-4111MI0015665-4q
5687695
5687762
+
undefined
cin-mir-4112MI0015666-4q
6021165
6021230
+
undefined
cin-mir-4113MI0015667-4q
4084885
4084934
-
undefined
cin-mir-4114MI0015668-scaffold_89
439106
439201
-
undefined
cin-mir-4115MI0015669-2q
3083844
3083906
+
undefined
cin-mir-4116MI0015670-13q
2094121
2094163
-
undefined
cin-mir-4117MI0015671-10q
scaffold_3241
1066062
976
1066133
1047
-
+
undefined
cin-mir-4118MI0015672-2q
6761012
6761061
-
undefined
cin-mir-4119MI0015673-undefined
cin-mir-4120MI0015674-2q
2q
5676685
5684347
5676737
5684399
+
+
undefined
cin-mir-4121MI0015675-8q
7015325
7015379
+
undefined
cin-mir-4122MI0015676-14q
scaffold_2008
2629820
6714
2629884
6778
-
-
undefined
cin-mir-4123MI0015677-1p
4078708
4078756
+
undefined
cin-mir-4124MI0015679-2q
872297
872346
+
undefined
cin-mir-4125MI0015680-1q
195690
195778
-
undefined
cin-mir-4126MI001568110014p
1032868
1032926
+
undefined
cin-mir-4127MI0015682-5q
3342682
3342736
+
undefined
cin-mir-4128MI0015683-scaffold_1082
10337
10403
+
undefined
cin-mir-4129MI0015684-undefined
cin-mir-4130MI0015685-9p
114607
114664
-
undefined
cin-mir-4131MI0015686-14p
1461930
1461977
-
undefined
cin-mir-4132MI0015687-7q
4818326
4818376
+
undefined
cin-mir-4133MI0015688-2q
6602247
6602337
-
undefined
cin-mir-4134MI0015689-3q
1306918
1306967
+
undefined
cin-mir-4135MI0015690-2q
3205448
3205502
+
undefined
cin-mir-4136MI0015691-2q
2069857
2069907
+
undefined
cin-mir-4137MI0015692-9p
589842
589900
+
undefined
cin-mir-4138MI0015693-5q
1748121
1748174
-
undefined
cin-mir-4139MI0015694-5q
2195206
2195257
+
undefined
cin-mir-4140MI0015695-1p
1656348
1656400
+
undefined
cin-mir-4141MI0015696-6q
1187422
1187475
+
undefined
cin-mir-4142MI0015697-scaffold_95
353409
353486
+
undefined
cin-mir-4143MI0015698-scaffold_176
50251
50303
-
undefined
cin-mir-4144MI0015699-10p
1531589
1531663
+
undefined
cin-mir-4145MI0015700-scaffold_137
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cin-mir-4146MI0015701-2q
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cin-mir-4147MI0015702-scaffold_95
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cin-mir-4148MI0015703-2q
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cin-mir-4149MI0015704-14q
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cin-mir-4150MI0015705-2q
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cin-mir-4151MI0015706-scaffold_1693
6716
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cin-mir-4152MI0015707-scaffold_95
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cin-mir-4153MI0015708-scaffold_197
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cin-mir-4154MI00157095014p
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cin-mir-4155MI0015710-scaffold_789
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cin-mir-4156MI0015711-9q
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cin-mir-4157MI0015712-scaffold_279
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cin-mir-4158MI0015713-12q
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cin-mir-4160MI0015715-1q
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cin-mir-4162MI0015717-1q
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cin-mir-4163MI0015718-9p
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cin-mir-4164MI0015719-scaffold_63
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cin-mir-4165MI0015720-1p
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undefined
cin-mir-4166MI0015721-8q
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cin-mir-4167MI0015722-undefined
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cin-mir-4169MI0015724-1q
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cin-mir-4170MI0015725-undefined
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cin-mir-4172MI0015727-scaffold_2290
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cin-mir-4173MI0015728-9p
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cin-mir-4176MI0015731-4q
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cin-mir-4177MI0015732-2q
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cin-mir-4178aMI0015733-scaffold_67
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cin-mir-4178bMI0015734-scaffold_67
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cin-mir-4179aMI0015735-8q
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cin-mir-4179bMI0019170-4q
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undefined
cin-mir-4180MI0015736-scaffold_26
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undefined
cin-mir-4181MI0015737-3q
3055652
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undefined
cin-mir-4182MI0015738-10p
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cin-mir-4183MI0015739-8q
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cin-mir-4184MI0015740-14q
3139392
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undefined
cin-mir-4185MI0015742-9q
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undefined
cin-mir-4186MI0015743-8q
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cin-mir-4187MI0015744-scaffold_1825
7369
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cin-mir-4188MI0015745-undefined
cin-mir-4189MI00157461008q
28178
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cin-mir-4190MI0015747-12q
2073982
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undefined
cin-mir-4191MI0015748-scaffold_158
76827
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cin-mir-4192MI0015749-7q
5090746
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cin-mir-4193MI0015750-12p
1425615
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cin-mir-4194MI0015751-3p
4387310
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cin-mir-4195MI0015752-13q
1466427
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cin-mir-4196MI0015753-scaffold_2935
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undefined
cin-mir-4197MI0015754-12q
2513017
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cin-mir-4198MI0015755-scaffold_55
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cin-mir-4199MI0015756-2q
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cin-mir-4200MI0015757-undefined
cin-mir-4201MI0015758-13q
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cin-mir-4202MI0015759100undefined
cin-mir-4203MI0015760-1q
5581142
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undefined
cin-mir-4204MI0015761-undefined
cin-mir-4205MI0015762-4q
4932469
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undefined
cin-mir-4206MI0015763400scaffold_543
36648
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cin-mir-4207MI0015764-5q
3939377
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cin-mir-4208MI0015765-1q
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cin-mir-4209MI0015766-9p
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cin-mir-4210MI0015767-undefined
cin-mir-4211MI0015768-scaffold_2347
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cin-mir-4212MI0015769-3p
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cin-mir-4213MI0015770-14p
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undefined
cin-mir-4214MI0015771-scaffold_102
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cin-mir-4215MI0015772-8q
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cin-mir-4216MI0015773-2q
6528008
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undefined
cin-mir-4217MI0015774-1q
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cin-mir-4218MI0015775-undefined
cin-mir-4219MI0015776-scaffold_89
504935
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cin-mir-4220MI00154942.5e+03scaffold_1385
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6649
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cin-mir-5596aMI0019160-5q
3438152
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cin-mir-5596bMI0019166-14q
1660166
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undefined
cin-mir-5597MI0019161-scaffold_554
1921
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cin-mir-5598MI0019162-scaffold_140
274944
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undefined
cin-mir-5599MI0019163-scaffold_194
69248
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cin-mir-5600MI0019164-7q
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cin-mir-5601MI0019165-8q
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cin-mir-5602MI0019167-3p
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cin-mir-5603MI0019168-scaffold_1895
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cin-mir-5604MI0019169-1q
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undefined
cin-mir-5605MI0019171-8q
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cin-mir-5606MI0019172-5q
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cin-mir-5607MI0019173-1q
4003739
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cin-mir-5608MI0019174-scaffold_1052
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undefined
cin-mir-5609MI0019175-10q
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cin-mir-5610MI0019176-9p
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undefined
cin-mir-5611MI0019177-scaffold_71
128684
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undefined
cin-mir-5612MI0019178-1q
1q
6076844
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6076901
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-
undefined

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