Physcomitrella patens miRNAs (229 sequences) [JGI1.1]

IDAccessionRPMChromosomeStartEndStrandConfidenceFetch
ppt-MIR156aMI00035061.2e+04scaffold_12
1858517
1858631
-
ppt-MIR156bMI00056961.22e+04scaffold_167
958010
958229
+
-
ppt-MIR156cMI00056541.21e+04scaffold_3
2089939
2090033
+
ppt-MIR160aMI00056552.37e+04scaffold_104
1047225
1047323
-
ppt-MIR160bMI00056561.91e+04scaffold_19
1176220
1176322
-
-
ppt-MIR160cMI00056572.97e+03scaffold_19
1175581
1175680
-
ppt-MIR160dMI00056583.05e+03scaffold_167
174750
174849
-
ppt-MIR160eMI00059012.9e+04scaffold_422
146965
147102
-
ppt-MIR160fMI00059022.37e+04scaffold_29
139485
139622
+
ppt-MIR160gMI00059032.79e+04scaffold_433
104783
104920
+
ppt-MIR160hMI00059044.69e+03scaffold_167
175044
175179
-
-
ppt-MIR160iMI00059051.9e+04scaffold_167
174013
174151
-
-
ppt-MIR166aMI0005660968scaffold_30
1354148
1354249
-
ppt-MIR166bMI00056591.22e+03scaffold_26
1562339
1562441
+
ppt-MIR166cMI0005906967scaffold_14
2065312
2065434
+
ppt-MIR166dMI0005907966scaffold_14
2065490
2065617
+
ppt-MIR166eMI00059081.21e+03scaffold_36
478447
478592
-
ppt-MIR166fMI0005909895scaffold_14
2066016
2066138
+
ppt-MIR166gMI0005910968scaffold_21
64657
64802
+
ppt-MIR166hMI0005911946scaffold_487
54795
54920
-
-
ppt-MIR166iMI0005912957scaffold_127
459114
459233
+
-
ppt-MIR166jMI0005913958scaffold_127
459279
459409
+
-
ppt-MIR166kMI0005914955scaffold_487
54980
55102
-
-
ppt-MIR166lMI0005915940scaffold_64
1475278
1475410
+
-
ppt-MIR166mMI0005916262scaffold_487
54440
54569
-
-
ppt-MIR167MI0005661--
ppt-MIR171aMI00056882.85e+03scaffold_71
1665613
1665703
+
ppt-MIR171bMI00056892.14e+03scaffold_19
293884
293975
-
-
ppt-MIR319aMI00034961.09e+04scaffold_19
89704
89872
+
-
ppt-MIR319bMI00034971.01e+04scaffold_234
55730
55889
-
ppt-MIR319cMI00034981.36e+04scaffold_29
1728494
1728682
-
-
ppt-MIR319dMI00034992.11e+04scaffold_266
191734
191903
+
-
ppt-MIR319eMI00056651.03e+04scaffold_99
433971
434144
+
-
ppt-MIR390aMI00034949.11e+03scaffold_119
1056046
1056182
-
-
ppt-MIR390bMI00034959.03e+03scaffold_80
1498969
1499143
-
-
ppt-MIR390cMI00047299.13e+03scaffold_264
204264
204398
-
ppt-MIR395MI0005667-scaffold_261
428635
428812
-
-
ppt-MIR408aMI000566812.1scaffold_333
250024
250171
-
-
ppt-MIR408bMI0005917674scaffold_313
118222
118365
-
-
ppt-MIR414MI0005669-scaffold_123
538836
539011
-
-
ppt-MIR419MI0005670-scaffold_177
53968
54049
-
-
ppt-MIR477aMI00056724.88e+04scaffold_242
477499
477583
+
ppt-MIR477bMI00062024.78e+04scaffold_216
329066
329235
-
-
ppt-MIR477cMI00056713.47e+04scaffold_50
2006194
2006278
+
-
ppt-MIR477dMI00059183.22e+04scaffold_165
751611
751764
+
-
ppt-MIR477eMI00059194.87e+04scaffold_14
198811
198937
-
-
ppt-MIR477fMI00056733.15e+04scaffold_234
21912
22038
-
-
ppt-MIR477gMI00056743.42e+04scaffold_275
298272
298399
+
ppt-MIR477hMI00059203.19e+04scaffold_27
2077199
2077353
+
-
ppt-MIR529aMI00059211.71e+03scaffold_427
191894
192042
-
-
ppt-MIR529bMI00059222.4e+03scaffold_40
841404
841552
-
-
ppt-MIR529cMI00059232.39e+03scaffold_551
45735
45885
-
-
ppt-MIR529dMI00059241.98e+03scaffold_40
841646
841781
-
-
ppt-MIR529eMI0005925690scaffold_427
192122
192243
-
-
ppt-MIR529fMI0005926705scaffold_18
1793125
1793246
+
ppt-MIR529gMI00059272.31e+03scaffold_18
1793338
1793486
+
-
ppt-MIR533aMI00035002.41e+04scaffold_89
1180775
1180876
-
ppt-MIR533bMI00047242.28e+04scaffold_31
1002600
1002724
-
-
ppt-MIR533cMI00059283.33e+04scaffold_100
50354
50524
-
ppt-MIR533dMI00059293.25e+04scaffold_19
828528
828665
+
-
ppt-MIR533eMI00059301.4e+03scaffold_224
413758
413910
+
ppt-MIR534aMI00035011.36e+04scaffold_439
50310
50509
-
-
ppt-MIR534bMI00056751.28e+04scaffold_23
1118731
1119009
-
ppt-MIR535aMI00035024.33e+04scaffold_184
577100
577234
-
ppt-MIR535bMI00035034.3e+04scaffold_56
756200
756280
-
-
ppt-MIR535cMI00035044.3e+04scaffold_101
1152052
1152132
+
-
ppt-MIR535dMI00047254.32e+04scaffold_44
180020
180104
+
ppt-MIR536aMI00035074.81e+04scaffold_56
1827125
1827323
-
-
ppt-MIR536bMI00056914.81e+04scaffold_16
354484
354705
-
-
ppt-MIR536cMI00056872.8e+03scaffold_25
2619793
2620014
-
-
ppt-MIR536dMI00059327.02e+04scaffold_73
909101
909543
+
-
ppt-MIR536eMI00059336.87e+04scaffold_82
417955
418418
+
-
ppt-MIR536fMI00059344.68e+04scaffold_56
1822559
1822734
+
-
ppt-MIR537aMI00035081.05e+04scaffold_52
1225399
1225588
+
ppt-MIR537bMI00035091.05e+04scaffold_1
3540236
3540384
+
-
ppt-MIR537cMI00059351.05e+04scaffold_1
3555321
3555469
+
-
ppt-MIR537dMI00059368.94e+03scaffold_2
4065022
4065199
-
ppt-MIR538aMI00035103.5e+04scaffold_234
166194
166372
-
-
ppt-MIR538bMI00035113.48e+04scaffold_19
2735034
2735151
-
ppt-MIR538cMI00035123.62e+04scaffold_369
340096
340255
-
ppt-MIR893MI0005676115scaffold_348
182950
183169
+
-
ppt-MIR894MI00056771.92e+03scaffold_10
1562414
1562633
-
-
ppt-MIR895MI0005678-scaffold_433
159731
159952
+
-
ppt-MIR897MI000568112.1scaffold_19
1445467
1445689
+
-
ppt-MIR898aMI00056957.81e+04scaffold_51
599206
599425
+
ppt-MIR898bMI00056947.45e+04scaffold_126
342471
342690
+
-
ppt-MIR899MI00056824.44e+03scaffold_459
1646
1867
+
-
ppt-MIR900MI00056835.54e+03scaffold_374
104328
104547
-
-
ppt-MIR901MI0005684271scaffold_182
652806
653026
-
-
ppt-MIR902aMI00056852.14e+04scaffold_45
1758930
1759152
+
-
ppt-MIR902bMI00056862.19e+04scaffold_2
4263201
4263423
-
-
ppt-MIR902cMI00059372.17e+04scaffold_179
820112
820245
+
ppt-MIR902dMI00059381.03e+04scaffold_45
1704540
1704668
-
-
ppt-MIR902eMI00059392.19e+04scaffold_11
1661349
1661481
+
ppt-MIR902fMI00059401.26e+04scaffold_536
16034
16156
+
-
ppt-MIR902gMI00059412.19e+04scaffold_17
2119374
2119514
+
ppt-MIR902hMI00059421.96e+04scaffold_19
562795
562922
-
ppt-MIR902iMI00059439.73e+03scaffold_488
34764
34883
-
ppt-MIR902jMI00059441.11e+04scaffold_5
3307166
3307338
+
ppt-MIR902kMI00059459.41e+03scaffold_74
647206
647347
-
ppt-MIR902lMI00059461.11e+04scaffold_6
1347479
1347612
+
-
ppt-MIR903MI00056902.76e+03scaffold_2178
scaffold_3126
scaffold_3506
scaffold_557
scaffold_557
scaffold_699
scaffold_802
852
8911
8104
74820
100561
4273
10926
1063
9122
8315
75031
100772
4484
11137
+
-
+
-
-
+
-
-
ppt-MIR904aMI00056923.21e+04scaffold_234
189702
189921
-
-
ppt-MIR904bMI00056933.19e+04scaffold_266
312404
312623
+
-
ppt-MIR1023aMI00059603.34e+04scaffold_59
1334025
1334194
+
ppt-MIR1023bMI00059613.22e+04scaffold_257
30575
30746
-
ppt-MIR1023cMI0005962311scaffold_51
950574
950741
-
ppt-MIR1023dMI0005963291scaffold_126
664283
664423
-
-
ppt-MIR1023eMI0010538454scaffold_51
960497
960616
+
ppt-MIR1024aMI00059649.74e+03scaffold_43
1696881
1697042
-
ppt-MIR1024bMI00059659.73e+03scaffold_336
345174
345297
-
ppt-MIR1025MI00059667.5e+04scaffold_52
1805710
1805919
-
ppt-MIR1026aMI00059672.12e+03scaffold_275
115212
115382
-
-
ppt-MIR1026bMI00059682.28e+03scaffold_234
416678
416829
+
ppt-MIR1027aMI00059693.12e+03scaffold_94
1388982
1389123
-
-
ppt-MIR1027bMI00059703.12e+03scaffold_94
1430737
1430878
-
-
ppt-MIR1028aMI00059716.55e+03scaffold_167
878809
879047
+
ppt-MIR1028bMI00059728.64e+03scaffold_34
1432898
1433091
+
ppt-MIR1028cMI00059739.11e+03scaffold_243
593002
593198
-
ppt-MIR1029MI00059741.22e+03scaffold_381
111310
111465
+
-
ppt-MIR1030aMI00059752.25e+03scaffold_110
19833
20047
+
ppt-MIR1030bMI00059762.12e+03scaffold_217
672403
672572
+
ppt-MIR1030cMI0005977871scaffold_305
498157
498374
-
ppt-MIR1030dMI0005978664scaffold_25
514775
514992
+
-
ppt-MIR1030eMI00059791.88e+03scaffold_25
515080
515287
+
ppt-MIR1030fMI0005980727scaffold_435
112638
112833
-
ppt-MIR1030gMI0005981657scaffold_245
435319
435526
-
-
ppt-MIR1030hMI00059822.24e+03scaffold_305
497882
498052
-
ppt-MIR1030iMI0005983753scaffold_435
112340
112569
-
-
ppt-MIR1030jMI0005984747scaffold_245
435034
435255
-
-
ppt-MIR1031aMI00059852.96e+03scaffold_58
126275
126482
+
-
ppt-MIR1031bMI00059862.7e+03scaffold_79
1240135
1240332
-
-
ppt-MIR1032MI00059871.18e+03scaffold_208
523177
523303
-
-
ppt-MIR1033aMI00059881.5e+03scaffold_13
1365532
1365650
-
-
ppt-MIR1033bMI00059891.62e+03scaffold_29
989044
989162
-
-
ppt-MIR1033cMI00059901.61e+03scaffold_291
313507
313625
-
-
ppt-MIR1033dMI00059911.3e+03scaffold_5
35705
35823
+
-
ppt-MIR1033eMI00059921.28e+03scaffold_256
157985
158103
-
-
ppt-MIR1034MI0005993440scaffold_202
211306
211450
-
ppt-MIR1035MI0005994805scaffold_217
384203
384372
+
ppt-MIR1036MI0005995366scaffold_94
882776
882952
-
ppt-MIR1037MI0005996110scaffold_100
446962
447089
+
-
ppt-MIR1038MI0005997603scaffold_8
1028777
1028896
+
ppt-MIR1039MI0005998202scaffold_325
243071
243200
+
-
ppt-MIR1040MI0005999331scaffold_62
1568544
1568685
+
ppt-MIR1041MI0006000222scaffold_8
62755
62896
+
-
ppt-MIR1042MI000600143.6scaffold_287
109461
109593
+
-
ppt-MIR1043MI0006002104scaffold_287
109841
109969
+
-
ppt-MIR1044MI0006003145scaffold_30
1040926
1041057
+
ppt-MIR1045MI0006004614scaffold_128
563490
563634
-
-
ppt-MIR1046MI0006005354scaffold_301
448437
448576
+
-
ppt-MIR1047MI0006006433scaffold_30
2152683
2152827
+
ppt-MIR1048MI0006007297scaffold_248
120170
120314
-
ppt-MIR1049MI0006008524scaffold_8
1132552
1132690
-
-
ppt-MIR1050MI00060091.65e+03scaffold_96
1006513
1006663
+
ppt-MIR1051MI0006010197scaffold_56
1824620
1824816
+
-
ppt-MIR1052MI00060113.73e+03scaffold_80
1382853
1383025
+
ppt-MIR1053MI000601216.9scaffold_38
1275612
1275732
+
-
ppt-MIR1054MI00060131.15e+03scaffold_112
1004878
1005122
-
-
ppt-MIR1055MI0006014146scaffold_391
252741
252894
-
-
ppt-MIR1056MI0006015581scaffold_193
686926
687070
+
-
ppt-MIR1057MI000601625.4scaffold_22
898467
898582
-
-
ppt-MIR1058MI0006017786scaffold_71
1697955
1698096
+
ppt-MIR1059MI0006018678scaffold_242
277353
277567
+
ppt-MIR1060MI0006019134scaffold_58
1496367
1496511
-
-
ppt-MIR1061MI000602038scaffold_64
284784
284915
+
-
ppt-MIR1062MI0006021117scaffold_49
1228135
1228318
-
-
ppt-MIR1063aMI00060222.5e+03scaffold_80
712778
712996
+
-
ppt-MIR1063bMI00060232.65e+03scaffold_125
310485
310770
+
ppt-MIR1063cMI00060242.53e+03scaffold_441
170781
171143
+
ppt-MIR1063dMI00060252.94e+03scaffold_71
1581249
1581604
+
ppt-MIR1063eMI00060262.84e+03scaffold_71
1575437
1575672
-
-
ppt-MIR1063fMI00060272.66e+03scaffold_63
917568
917838
-
ppt-MIR1063gMI00060282.86e+03scaffold_20
864059
864369
-
ppt-MIR1063hMI00060292.45e+03scaffold_75
1216009
1216235
+
-
ppt-MIR1064MI000603046.9scaffold_202
191936
192050
+
-
ppt-MIR1065MI0006031676scaffold_75
65996
66207
-
ppt-MIR1066MI0006032613scaffold_54
45985
46103
+
-
ppt-MIR1067MI0006033180scaffold_220
156632
156799
+
-
ppt-MIR1068MI0006034277scaffold_244
13340
13543
-
-
ppt-MIR1069MI000603567.1scaffold_72
21063
21306
-
-
ppt-MIR1070MI0006036170scaffold_109
1216085
1216196
+
-
ppt-MIR1071MI000603797.2scaffold_312
233202
233336
-
-
ppt-MIR1072MI0006038581scaffold_15
2064032
2064340
-
ppt-MIR1073MI00060395.09e+03scaffold_313
116800
117000
-
ppt-MIR1074MI00060401.3e+03scaffold_105
203903
204032
-
-
ppt-MIR1075MI0006041419scaffold_5
1647137
1647278
+
-
ppt-MIR1076MI00060421.67e+03scaffold_245
121314
121540
+
-
ppt-MIR1077MI000604388.4scaffold_387
337061
337212
-
-
ppt-MIR1078MI0006044877scaffold_117
583847
583957
+
-
ppt-MIR1079MI000604542.4scaffold_139
409407
409557
+
-
ppt-MIR1211MI00047108.28e+03scaffold_227
732164
732275
-
ppt-MIR1212MI00047112.72e+04scaffold_107
19126
19214
-
ppt-MIR1214MI00047133.01e+03scaffold_141
592761
592853
-
ppt-MIR1215MI00047141.77e+04scaffold_173
168162
168288
-
-
ppt-MIR1216MI00047153.62e+03scaffold_77
341294
341451
+
ppt-MIR1217MI00047168.36e+03scaffold_100
542222
542332
+
ppt-MIR1218MI00047171.15e+04scaffold_101
629067
629204
+
-
ppt-MIR1219aMI00047184.86e+03scaffold_625
20799
20933
+
ppt-MIR1219bMI00047193.32e+03scaffold_625
21055
21132
+
ppt-MIR1219cMI00047203.72e+03scaffold_37
2003197
2003348
+
-
ppt-MIR1219dMI00047213.27e+03scaffold_37
2002951
2003086
+
-
ppt-MIR1220aMI00047222.93e+03scaffold_161
204425
204629
+
-
ppt-MIR1220bMI0004723350scaffold_161
217252
217456
-
-
ppt-MIR1221MI00047261.43e+04scaffold_106
956224
956400
-
ppt-MIR1222aMI00047274.07e+04scaffold_219
310476
310605
+
ppt-MIR1222bMI00059473.35e+04scaffold_124
505531
505658
-
-
ppt-MIR1222cMI00059483.33e+04scaffold_83
1094080
1094213
-
-
ppt-MIR1222dMI00059492.08e+03scaffold_79
1036180
1036310
+
-
ppt-MIR1222eMI00059503.2e+04scaffold_181
736891
737019
+
-
ppt-MIR1223aMI00047281.38e+04scaffold_448
173163
173288
-
ppt-MIR1223bMI00059511.42e+04scaffold_154
555230
555372
-
-
ppt-MIR1223cMI00059521.12e+04scaffold_448
172807
172949
-
-
ppt-MIR1223dMI00059539.41e+03scaffold_4
1660341
1660474
+
ppt-MIR1223eMI00059546.66e+03scaffold_57
332551
332676
+
ppt-MIR1223fMI00059556.32e+03scaffold_154
556184
556307
-
ppt-MIR1223gMI00059566.44e+03scaffold_448
173857
173972
-
ppt-MIR1223hMI00059571.17e+03scaffold_4
1659573
1659704
+
-
ppt-MIR1223iMI00059581.89e+03scaffold_57
332815
332938
+
ppt-MIR1223jMI00059591.03e+04scaffold_154
555557
555704
-
ppt-MIR2077MI0010529241scaffold_158
358113
358236
+
-
ppt-MIR2078MI0010530211scaffold_164
899534
899709
+
ppt-MIR2079MI0010531746scaffold_207
264090
264212
+
ppt-MIR2080MI0010532639scaffold_213
519123
519251
+
ppt-MIR2081MI0010535261scaffold_3
3507247
3507368
+
ppt-MIR2082MI00105362.56e+03scaffold_345
14320
14450
+
ppt-MIR2083MI00105377.18e+03-
ppt-MIR2084MI0010533163scaffold_3
3110246
3110359
+
-
ppt-MIR2085MI001053425.4scaffold_3
3110246
3110359
-
-

Get selected sequences:
Select sequences and output type, then click "Fetch Sequences":