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miRBase |
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![]() 11 publications mentioning mmu-mir-488Open access articles that are associated with the species Mus musculus and mention the gene name mir-488. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary. |
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Other miRNAs from this paper: mmu-let-7g, mmu-let-7i, mmu-mir-9-2, mmu-mir-132, mmu-mir-145a, mmu-mir-184, mmu-mir-200b, mmu-mir-30e, mmu-let-7d, mmu-mir-200a, mmu-let-7a-1, mmu-let-7a-2, mmu-let-7b, mmu-let-7c-1, mmu-let-7c-2, mmu-let-7e, mmu-let-7f-1, mmu-let-7f-2, mmu-mir-218-1, mmu-mir-218-2, mmu-mir-9-1, mmu-mir-9-3, mmu-mir-7a-1, mmu-mir-7a-2, mmu-mir-375, mmu-mir-383, mmu-mir-335, mmu-mir-384, mmu-mir-429, mmu-mir-471, mmu-mir-145b, mmu-let-7j, mmu-let-7k, mmu-mir-9b-2, mmu-mir-9b-1, mmu-mir-9b-3
The double-staining of POMC-Tau-Topaz GFP mice brain sections with the fluorescein-labeled probes and an antibody against GFP revealed that a high proportion of POMC neurons express mir-383, mir-384-3p, and mir-488, suggesting that these miRNAs target the expression of protein-coding genes that are distributed in this neuronal population.
[score:7]
It was observed that mir-383, mir-384-3p, and mir-488 were up-regulated in ob/ob and db/db mice and mir-488 was down-regulated in leptin -treated mice.
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Quantitative analysis of double-labeled neurons showed that, in the whole arcuate nucleus, 80.7 ± 3.4% of the GFP -positive neurons expressed mir-383 miRNAs, 39.8 ± 2.5% of the GFP -positive cells expressed mir-384-3p miRNAs and 64.9 ± 3.2% of the GFP- immunoreactive cells contained mir-488 miRNAs (Figures 2D–F).
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Surprisingly, i. c. v administration of leptin in mice only decreased the expression of mir-488 in the hypothalamus suggesting that the expression of mir-488 is under the control of leptin.
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Considering these expression patterns, we focused our work on mir-383, mir-384-3p as mir-488 which are expressed in the hypothalamus.
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Relative expression levels of mir-383, mir-384-3p, mir-471-3p, and mir-488 are expressed in fold change of the normalized level obtained in the hypothalamus.
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The above data suggest that leptin may be involved in the regulation of the expression of mir-383, mir-384-3p, and mir-488 miRNAs in the hypothalamus.
[score:4]
This data provides the first evidence that the expressions of mir-383, mir-384-3p, and mir-488 are associated with an impaired leptin signaling pathway.
[score:3]
In one hand, we identified three conserved miRNAS (mir-383, mir-384-3p, and mir-488) with targetscan.
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The expression of mir-488 is decreased in the hypothalamus of C57BL/6 mice after central leptin administrationBecause leptin exhibits a large range of effect at peripheral level (Margetic et al., 2002), we next investigated the effect of a daily i. c. v leptin administration (5 μg/mice) during 4 days on hypothalamic expression of mir-383, mir-384-3p, and mir-488 miRNAs.
[score:3]
The expression of mir-488 is decreased in the hypothalamus of C57BL/6 mice after central leptin administration.
[score:3]
Firstly, we studied the pattern of expression of miRNAs, i. e., mir-383, mir-384-3p, and mir-488, in the CNS.
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The expression profiles of mir-383, mir-384-3p, and mir-488 miRNAs presented many similarities, but also major differences.
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White arrowheads point to POMC neurons expressing miR-383, miR-384-3p or miR-488 miRNA.
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For instance, mir-488 could modulate the expression of STAT3.
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The highest amounts of mir-384-3p miRNAs were found in the brainstem, cerebellum, and olfactory bulb while mir-488 miRNAs were wi dely expressed throughout the structures studied.
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The mir-488 miRNAs were wi dely expressed throughout the CNS with the same intensity (Figure 1B).
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Figure 2 Expression of mir-383, mir-384-3p, and mir-488 in POMC neurons of the arcuate nucleus.
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To evaluate whether leptin signaling in hypothalamus is essential for the expression of mir-383, mir-384-3p, or mir-488 miRNAs, we analyzed the expression of these miRNAs among groups of leptin -deficient (ob/ob) mice and C57BL/6 controls.
[score:3]
We observed an up-regulation of mir-383, mir-384-3p, and mir-488 miRNAs in 12-week-old ob/ob animals treated with vehicle compared to C57BL/6 control mice (+42, +32%; P < 0.05 and +137%; P < 0.01, respectively) (Figure 4).
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Similarly, double staining of brain sections with the GFP antibody and mir-384-3p or mir-488 probes showed that a large proportion of GFP neurons expressed mir-384-3p or mir-488 miRNAs (Figures 2B,C).
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In accordance with this hypothesis, we observed in the databases that mir-488 can also target PC1 3′UTR.
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The present study shows that leptin peripheral treatment rescues the expression of mir-383, mir-384-3p, and mir-488 in ob/ob mice.
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To directly test this hypothesis, ob/ob mice were i. p. injected with leptin at dose of 5 mg/kg and the hypothalamic expression of mir-383, mir-384-3p, and mir-488 miRNAs was evaluated by qRT-PCR 4 h later.
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As expected, leptin treatment significantly reduced hypothalamic expression of mir-383, mir-384-3p, and mir-488 miRNAs in 12-week-old ob/ob animals treated with leptin compared to vehicle -treated ob/ob mice (−25, −21%; P < 0.05 and −58%; P < 0.01, respectively) (Figure 4).
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As shown in Figure 3B, the mir-383, mir-384-3p, and mir-488 miRNAs levels were over-expressed in 16-week-old db/db mice compared to C57BL/6 animals (+25, +32 and +110%, respectively; P < 0.001).
[score:2]
Based on bioinformatic predictions of their involvement in POMC-signaling pathway and their conservation among vertebrates, the expression of mir-383, mir-384-3p, and mir-488 were investigated in mo dels of obesity characterized by a decrease of POMC mRNA expression and leptin insufficiency (ob/ob) or leptin insensitivity (db/db) (Mizuno et al., 1998).
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In contrast, leptin significantly decreased mir-488 miRNA contents in the hypothalamus after treatment (−60%; P < 0.01) (Figure 5D).
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In many brain regions, mir-383, mir-384-3p, and mir-488 miRNAs distribution patterns did not match each other suggesting that the three miRNAs also exert specific roles.
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Absence of leptin resulted in a significant increase in mir-383, mir-384-3p, and mir-488 miRNAs (+400%, +101%; P < 0.05 and +605%; P < 0.001, respectively) (Figure 3A).
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The proportion of GFP neurons that exhibited mir-383, mir-384-3p, or mir-488 miRNAs were not different in the anterior and posterior subdivisions of the arcuate nucleus (Figures 2D,F).
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For the first time, we found that the miRNAs encoding the mir-383, mir-384-3p, and mir-488 miRNAs are abundant in the arcuate nucleus.
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These observations suggest that, mir-383, mir-384-3p, and mir-488 in the arcuate nucleus are involved in a complex network controlling the sensitivity of POMC neurons to peripheral signals.
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org are mir-384-3p, mir-371-3p, and mir-488 (Figure 1A).
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Because leptin exhibits a large range of effect at peripheral level (Margetic et al., 2002), we next investigated the effect of a daily i. c. v leptin administration (5 μg/mice) during 4 days on hypothalamic expression of mir-383, mir-384-3p, and mir-488 miRNAs.
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We used the antisense probes 5′-AGCCACAGTCACCTTCTGATCTTT-3′-6FAM for mir-383; 5′-TTACATTGCCTAGGAATTGTTTACATA-3′-6FAM for mir-384-3p; 5′-AAAACTCTCACGATAATAGACCCTT-3′-6FAM for mir-488.
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Although mir-383, mir-384-3p, and mir-488 miRNAs were evenly distributed along the rostro-caudal axis of the arcuate nucleus, the proportion of double labeled GFP/ mir-383, GFP/ mir-384-3p, and GFP/ mir-488 neurons did not reflect each other in terms of the proportion of their distribution.
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The levels of mir-383, mir-384-3p, and mir-488 miRNAs in the hypothalamus of 16-week-old ob/ob and C57BL/6 mice were determined by qRT-PCR.
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Because the lack of circulating leptin was associated with a significant increase in the miRNAs of interest, we measured the expression of mir-383, mir-384-3p, and mir-488 miRNAs in the hypothalamus of db/db mice, a mo del that exhibits a non-functional leptin receptor leading to impaired leptin signaling.
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Other miRNAs from this paper: hsa-mir-30a, hsa-mir-96, mmu-mir-30a, mmu-mir-126a, mmu-mir-182, hsa-mir-192, mmu-mir-204, hsa-mir-10a, hsa-mir-182, hsa-mir-204, hsa-mir-126, mmu-mir-192, mmu-mir-200a, mmu-mir-96, mmu-mir-10a, hsa-mir-200a, hsa-mir-429, mmu-mir-429, hsa-mir-488, mmu-mir-126b
Similarly, at E17.5 in Pkd1 [-/- ]animals, the up-regulation of Fgfr3 and Fgf10 (components of MAPK signaling) and down-regulation of their target miRNAs- miR-488 and miR-126-5p respectively, may stimulate MAPK signaling and cell proliferation in Pkd1 [-/- ]samples.
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Similarly, down-regulation of miR-10a, miR-126-5p, miR-204, and miR-488 at E17.5 were inversely correlated with up-regulation of Ltbp1, Edil3, P2rx7, and Fgfr3 respectively (Additional file 21).
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miR-204 and miR-488 (A) were down-regulated in Pkd1 [-/- ]kidneys whereas miR10a, miR-30a, miR-96, miR-126-5p, miR-182, miR-200a and miR-429 (B) were up-regulated in Pkd1 [-/- ]kidneys.
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Among the 9 miRNAs tested at E14.5, only two miRNAs, miR-488 and miR-204, were down-regulated in Pkd1 [-/- ]kidneys compared to WT, miR-96 did not change, and the remaining 6 miRNAs were up-regulated in Pkd1 [-/- ]kidneys compared to WT (Figure 7).
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For example, miR-30a-5p may be involved in histone deactylase inhibitor pathways, apoptosis, calcium and Wnt signaling (Figure 9); miR-10a may be involved in TGF-β and hedgehog signaling; miR-204 may be involved in calcium signaling while miR-488 may be involved in MAPK signaling by targeting Fgfr3 (Figure 9).
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Expression of 9 miRNAs (miR-204, miR-488, miR10a, miR-30a, miR-96, miR-126-5p, miR-182, miR-200a and miR-429), predicted to target significantly regulated genes at E14.5 was assayed using miRNA-qPCR.
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Expression of 9 miRNAs (miR-10a, miR-126-5p, miR-200a, miR-204, miR-429, miR-488, miR-96, miR-182 and miR-30a-5p), predicted to target significantly regulated genes at E17.5 was evaluated using miRNA-qPCR assays.
[score:3]
We tested this hypothesis by determining the differential expression of 9 miRNAs (mmu-miR-10a, mmu-miR-30a-5p, mmu-miR-96, mmu-miR-126-5p, mmu-miR-182, mmu-miR-200a, mmu-miR-204, mmu-miR-429, and mmu-miR-488) between WT and Pkd1 [-/- ]genotypes at E14.5 and E17.5 (Figures 7 and 8).
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We observed that miRNAs: miRs-10a, -30a-5p, -96, -126-5p, -182, -200a, -204, -429, and -488; and the such as miR-126-5p-Fgf10, miR-488-Fgfr3, miR-182-Hdac9, miR-204-P2rx7 and miR-96-Sox6 (as shown in Table 6) have not been previously reported in ADPKD.
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Other miRNAs from this paper: hsa-mir-488, hsa-mir-622
We also noticed that several potential PtpA -targeted ncRNA genes (such as miR-488, CASC2, and miR-622) are involved in tumor progression through regulating cell apoptosis, proliferation, and migration 55– 57.
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Other miRNAs from this paper: mmu-mir-140, mmu-mir-141, mmu-mir-200a, mmu-let-7a-2, mmu-mir-96, mmu-mir-339, mmu-mir-384, mmu-mir-532, mmu-mir-486a, mmu-mir-494, mmu-mir-503, mmu-mir-763, mmu-mir-497a, mmu-mir-697, mmu-mir-1955, mmu-mir-1958, mmu-mir-2861, mmu-mir-3091, mmu-mir-486b, mmu-mir-497b
On the other hand, up-regulated miR-384-5p in CTX and miR-488-3p in MB were among the miRNAs with the highest positive correlations with protein modules associated with the EoC trait.
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Other miRNAs from this paper: mmu-mir-1a-1, mmu-mir-124-3, mmu-mir-9-2, mmu-mir-153, mmu-mir-154, mmu-mir-190a, mmu-mir-193a, mmu-mir-130b, mmu-mir-21a, mmu-mir-29a, mmu-mir-323, mmu-mir-325, mmu-mir-1a-2, mmu-mir-32, mmu-mir-33, mmu-mir-222, mmu-mir-124-1, mmu-mir-124-2, mmu-mir-9-1, mmu-mir-9-3, mmu-mir-335, mmu-mir-409, mmu-mir-431, mmu-mir-744, mmu-mir-681, mmu-mir-714, mmu-mir-190b, mmu-mir-193b, mmu-mir-877, mmu-mir-1b, mmu-mir-21b, mmu-mir-21c, mmu-mir-9b-2, mmu-mir-124b, mmu-mir-9b-1, mmu-mir-9b-3
miR-431, miR-714, miR-744, miR-877, miR-130b, miR-21, miR-323-3p, miR-325, miR-409-3p, miR-154*, and miR-681 were significantly increased 4 days post-sciatic nerve crush in pre-conditioned DRGs, while miR-190, miR-1, miR-33, miR-32, miR-153, miR-335-5p, miR-193, and miR-488 showed significantly decreased expression.
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Other miRNAs from this paper: hsa-mir-30a, mmu-mir-30a, mmu-mir-30b, mmu-mir-188, hsa-mir-30c-2, hsa-mir-30d, mmu-mir-30e, hsa-mir-34a, hsa-mir-221, mmu-mir-296, mmu-mir-34c, mmu-mir-34b, hsa-mir-30b, hsa-mir-188, mmu-mir-30c-1, mmu-mir-30c-2, mmu-mir-30d, mmu-mir-34a, mmu-mir-329, mmu-mir-340, mmu-mir-346, mmu-mir-221, hsa-mir-30c-1, hsa-mir-34b, hsa-mir-34c, hsa-mir-296, hsa-mir-30e, hsa-mir-340, hsa-mir-346, hsa-mir-329-1, hsa-mir-329-2, hsa-mir-488, hsa-mir-506, hsa-mir-671, hsa-mir-1224, mmu-mir-1224, mmu-mir-671, mmu-mir-718, hsa-mir-1306, mmu-mir-1306, hsa-mir-718, mmu-mir-30f
Target sites of two miRNA families, miR-488 and miR-329, are also very well conserved across both species.
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Other miRNAs from this paper: hsa-mir-17, hsa-mir-22, hsa-mir-29a, hsa-mir-98, hsa-mir-29b-1, hsa-mir-29b-2, mmu-mir-27b, mmu-mir-29b-1, mmu-mir-125a, mmu-mir-125b-2, mmu-mir-9-2, mmu-mir-140, mmu-mir-146a, mmu-mir-152, mmu-mir-290a, hsa-mir-27b, hsa-mir-125b-1, hsa-mir-140, hsa-mir-152, hsa-mir-9-1, hsa-mir-9-2, hsa-mir-9-3, hsa-mir-125a, hsa-mir-125b-2, hsa-mir-146a, mmu-mir-22, mmu-mir-29a, mmu-mir-29c, mmu-mir-98, mmu-mir-344-1, mmu-mir-17, mmu-mir-29b-2, mmu-mir-9-1, mmu-mir-9-3, mmu-mir-125b-1, hsa-mir-29c, hsa-mir-370, hsa-mir-373, mmu-mir-370, hsa-mir-488, hsa-mir-146b, mmu-mir-344d-3, mmu-mir-344d-1, mmu-mir-344d-2, mmu-mir-146b, mmu-mir-344-2, mmu-mir-344e, mmu-mir-344b, mmu-mir-344c, mmu-mir-344g, mmu-mir-344f, mmu-mir-344h-1, mmu-mir-344h-2, mmu-mir-344i, mmu-mir-290b, mmu-mir-9b-2, mmu-mir-9b-1, mmu-mir-9b-3
They suggested miR-22 and miR-125 as possible master regulators, and miR-344-5p/484 and miR-488 as possible master coregulators that may influence the genes involved in one-carbon metabolism.
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Other miRNAs from this paper: hsa-mir-448, mmu-mir-448, hsa-mir-483, hsa-mir-488, hsa-mir-502, mmu-mir-483, hsa-mir-1264, hsa-mir-1298, hsa-mir-764, mmu-mir-1264, mmu-mir-1298, mmu-mir-764, mml-mir-448, mml-mir-488, mml-mir-502, hsa-mir-1911, hsa-mir-1912, mml-mir-764, mmu-mir-1912, hsa-mir-4728, mml-mir-1298, mml-mir-1911, mmu-mir-1911
Genomic mapping of HTR2C transcripts (NM_000868, NM_001256760 and NM_001256761) and their six intragenic miRNAs (miR-1912, miR-764, miR-1264, miR-1298, miR-1911 and miR-488) as well as the expression correlation between HTR2C and these miRNAs.
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Other miRNAs from this paper: hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, hsa-mir-16-1, hsa-mir-17, hsa-mir-21, hsa-mir-16-2, mmu-let-7g, mmu-let-7i, mmu-mir-124-3, mmu-mir-127, mmu-mir-9-2, mmu-mir-137, mmu-mir-10b, mmu-mir-129-1, hsa-mir-129-1, hsa-mir-139, hsa-mir-7-1, hsa-mir-7-2, hsa-mir-7-3, hsa-mir-10b, hsa-mir-218-1, hsa-mir-218-2, hsa-mir-221, mmu-let-7d, hsa-let-7g, hsa-let-7i, hsa-mir-124-1, hsa-mir-124-2, hsa-mir-124-3, hsa-mir-137, hsa-mir-9-1, hsa-mir-9-2, hsa-mir-9-3, hsa-mir-127, hsa-mir-129-2, mmu-let-7a-1, mmu-let-7a-2, mmu-let-7b, mmu-let-7c-1, mmu-let-7c-2, mmu-let-7e, mmu-let-7f-1, mmu-let-7f-2, mmu-mir-16-1, mmu-mir-16-2, mmu-mir-21a, mmu-mir-129-2, mmu-mir-346, mmu-mir-17, mmu-mir-139, mmu-mir-218-1, mmu-mir-218-2, mmu-mir-221, mmu-mir-124-1, mmu-mir-124-2, mmu-mir-9-1, mmu-mir-9-3, mmu-mir-7a-1, mmu-mir-7a-2, mmu-mir-7b, hsa-mir-346, hsa-mir-451a, mmu-mir-451a, hsa-mir-488, hsa-mir-451b, mmu-mir-21b, mmu-let-7j, mmu-mir-21c, mmu-mir-451b, mmu-let-7k, mmu-mir-129b, mmu-mir-9b-2, mmu-mir-124b, mmu-mir-9b-1, mmu-mir-9b-3
Examples of such miRNAs include those that show enriched expression in brain tissue such as miR-451 and miR-488 (see [32]) and miRNAs that have been implicated in the etiology of other tumor types, such as miR-346 in follicular thyroid carcinoma [36].
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Other miRNAs from this paper: hsa-mir-488
We found that rs17737058, located in the 3′UTR of NCOA1 gene, causes the disruption of the binding with the hsa-miR-488* miRNA.
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Other miRNAs from this paper: mmu-mir-23b, mmu-mir-27b, mmu-mir-144, mmu-mir-182, mmu-mir-183, mmu-mir-24-1, mmu-mir-191, mmu-mir-203, mmu-mir-143, mmu-mir-295, mmu-mir-302a, mmu-mir-106a, mmu-mir-19b-2, mmu-mir-20a, mmu-mir-23a, mmu-mir-24-2, mmu-mir-29a, mmu-mir-27a, mmu-mir-322, mmu-mir-148b, mmu-mir-10a, mmu-mir-17, mmu-mir-218-1, mmu-mir-218-2, mmu-mir-19b-1, mmu-mir-411, mmu-mir-20b, mmu-mir-291b, mmu-mir-654, mmu-mir-208b
Additionally, seven miRNAs exhibited a consistent pattern of no amplification in TEC from infected animals (miR-144, miR-208b, miR-291b-3p, miR-295, miR-302a, miR-488, and miR-654-3p, Figure S4 in).
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