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[+]
score:
11
Other miRNAs from this paper: dme-mir-1, dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-3, dme-mir-5, dme-mir-8, dme-mir-9a, dme-mir-10, dme-mir-92a, dme-mir-276a, dme-mir-277, dme-mir-278, dme-mir-279, dme-mir-34, dme-mir-276b, dme-mir-92b, dme-bantam, dme-mir-31b, dme-mir-305, dme-mir-9c, dme-mir-9b, dme-let-7, dme-mir-31a, dme-mir-309, dme-mir-2c, dme-mir-252, tca-mir-1, tca-mir-2-3, tca-mir-2-1, tca-mir-2-2, tca-let-7, tca-mir-8, tca-mir-10, tca-mir-31, tca-mir-34, tca-mir-71, tca-mir-92a, tca-mir-92b, tca-mir-277, tca-mir-279a, tca-mir-305, tca-mir-9b, dvi-mir-2a-2, dvi-mir-2a-1, dvi-mir-2c, dvi-mir-279, dvi-mir-9c, dvi-mir-9b, dvi-mir-9a, dvi-mir-278, dvi-mir-305, dvi-mir-276b, dvi-mir-276a, dvi-mir-277, dvi-mir-2b, dvi-mir-8, dvi-mir-34, dvi-mir-3, dvi-mir-309, dvi-mir-1, dvi-mir-10, dvi-mir-5, dvi-mir-92b, dvi-bantam, dvi-mir-31a, dvi-mir-31b, dvi-mir-92a, dvi-let-7, tca-mir-9a, tca-bantam, tca-mir-279b, tca-mir-9c, tca-mir-279c, tca-mir-9d, tca-mir-309a, tca-mir-92c, tca-mir-279d, tca-mir-29, tca-mir-252a, tca-mir-252b, tca-mir-279e, tca-mir-309b, tca-mir-9e, dvi-mir-252, tca-mir-309c
Our analyses in the very early stages of embryo development (NFE and ED0) of B. germanica, T. castaneum, D. melanogaster and D. virilis indicated that miRNAs from MIR-276 and MIR-279 families are differentially expressed in short germ-band species, whereas those of MIR-92 family are differentially expressed in long germ-band species.
[score:6]
The only reported function for MIR-276 is to promote egg-hatching synchrony by upregulating the transcription coactivator gene brahma in the locust Locusta migratoria [36].
[score:4]
PCA (Fig. 5b) showed this grouping to be mostly driven by the MIR-276, MIR-279 and MIR-92 families.
[score:1]
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| 2 |
[+]
score:
1
Other miRNAs from this paper: dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-9a, dme-mir-10, dme-mir-12, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-276a, dme-mir-133, dme-mir-276b, dme-mir-210, dme-mir-31b, dme-mir-9c, dme-mir-306, dme-mir-9b, dme-mir-31a, dme-mir-309, dme-mir-316, dme-mir-317, dme-mir-2c, ame-mir-12, ame-mir-133, ame-mir-210, ame-mir-276, ame-mir-2-1, ame-mir-2-2, ame-mir-317, ame-mir-9a, ame-mir-9b, bmo-mir-9a, bmo-mir-10, bmo-mir-276, bmo-mir-31, bmo-mir-71, ame-mir-10, ame-mir-137, ame-mir-13a, ame-mir-2-3, ame-mir-29b, ame-mir-31a, ame-mir-375, ame-mir-71, ame-mir-932, dme-mir-193, dme-mir-375, dme-mir-932, dme-mir-970, dme-mir-971, dme-mir-989, dme-mir-137, dme-mir-1006, dme-mir-1007, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-13a, bmo-mir-13b, bmo-mir-133, bmo-mir-210, bmo-mir-317, tca-mir-2-3, tca-mir-2-1, tca-mir-2-2, tca-mir-10, tca-mir-12, tca-mir-13a, tca-mir-13b, tca-mir-31, tca-mir-71, tca-mir-133, tca-mir-137, tca-mir-210, tca-mir-317, tca-mir-932, tca-mir-9b, bmo-mir-12, bmo-mir-137, bmo-mir-932, bmo-mir-9b, tca-mir-9a, tca-mir-970, ame-mir-13b, ame-mir-1006, ame-mir-316, bmo-mir-970, lmi-mir-276, lmi-mir-210, lmi-mir-10, lmi-mir-9a, bmo-mir-9c, bmo-mir-306a, bmo-mir-989a, bmo-mir-316, bmo-mir-1175, bmo-mir-9d, bmo-mir-750, bmo-mir-375, bmo-mir-306b, api-mir-137, api-mir-10, api-mir-276, api-mir-13a, api-mir-210, api-mir-29, api-mir-2a, api-mir-2b, api-mir-2c, api-mir-316, api-mir-317, api-mir-71, api-mir-971, api-mir-9a, api-mir-9b, api-mir-306, api-mir-3049, bmo-mir-989b, ame-mir-1175, ame-mir-193, ame-mir-989, ame-mir-3049, ame-mir-971, ame-mir-3770, ame-mir-9c, ame-mir-306, ame-mir-750, tca-mir-9c, tca-mir-316, tca-mir-9d, tca-mir-309a, tca-mir-3049, tca-mir-375, tca-mir-29, tca-mir-1175, tca-mir-750, tca-mir-989, tca-mir-309b, tca-mir-193, tca-mir-6012, tca-mir-9e, ame-mir-6037, ame-mir-6012, ame-mir-2b, tca-mir-309c, tca-mir-971b
With this approach, we discarded three miRNA loci that would correspond to MIR-137, MIR-29 and MIR-276 families, as they resulted from misassembling artefacts.
[score:1]
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