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5 publications mentioning ssc-mir-374aOpen access articles that are associated with the species Sus scrofa and mention the gene name mir-374a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary. |
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| 1 |
Other miRNAs from this paper: ssc-mir-122, ssc-mir-148a, ssc-mir-181b-2, ssc-mir-28, ssc-mir-95, ssc-mir-181c, ssc-mir-183, ssc-mir-27a, ssc-let-7i, ssc-mir-128-1, ssc-mir-186, ssc-mir-204, ssc-mir-30b, ssc-mir-146b, ssc-mir-181a-1, ssc-mir-215, ssc-mir-128-2, ssc-mir-143, ssc-mir-181a-2, ssc-mir-181b-1, ssc-mir-181d, ssc-mir-374b, ssc-mir-424, ssc-mir-195, ssc-mir-744, ssc-mir-22, ssc-mir-376a, ssc-mir-490-1, ssc-mir-376c, ssc-mir-376b, ssc-mir-4332, ssc-mir-218-1, ssc-mir-146a, ssc-mir-126, ssc-mir-218b, ssc-mir-219a, ssc-mir-2320, ssc-mir-144, ssc-mir-150-1, ssc-mir-150-2, ssc-mir-218-2, ssc-mir-490-2, ssc-mir-219b
Among the 13 DEmiRNAs that significantly differentially expressed at all the three time points in both breeds, miR-144, miR-219 and miR-374a were also differentially expressed in PAMs after infection with PRRSV 24, and miR-183, miR-219, miR-28-3p and miR-143-3p were all up-regulated significantly at 3, 5, 7 dpi in both breeds.
[score:8]
High consistency of expression patterns of miRNA-2320-5p and miR-374a-3p were observed between qRT-PCR and the deep sequencing results in Landrace pigs (Fig. 3a, b, c and d).
[score:3]
We randomly chose three DEmiRNAs (miR-2320-5p, miR-374a-3p, Novel miRNA (5:5388562-5388582)) in the lung tissues of Landrace pigs from our data.
[score:1]
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| 2 |
Other miRNAs from this paper: hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-mir-16-1, hsa-mir-17, hsa-mir-26a-1, hsa-mir-30a, hsa-mir-103a-2, hsa-mir-103a-1, hsa-mir-16-2, hsa-mir-27b, hsa-mir-26a-2, hsa-mir-374a, hsa-mir-451a, ssc-mir-26a, ssc-mir-103-1, hsa-mir-454, hsa-mir-103b-1, hsa-mir-103b-2, ssc-mir-16-2, ssc-mir-16-1, ssc-mir-17, ssc-mir-30a, ssc-let-7a-1, ssc-mir-103-2, ssc-mir-27b, ssc-mir-451, hsa-mir-451b, ssc-let-7a-2, ssc-mir-454
Similarly, we observed miR-374a up-regulation, which has been described as CEBPB regulator [61], controlling the expression of IL- 6, IL- 8 and other acute phase inflammatory genes during S. Typhimurium infection [62].
[score:7]
miRNA qPCR microArray miR-374a-5p 1.18* 2.27* miR-30a-5p 1.02 2.4* miR-451 2.87*** 2.3* miR-454-3p −1.09 −2.27 Let-7b-5p 1.11 3.22* miR-27b-3p 1.07 2.62* All values are expressed in fold change (FC) compared to controls.
[score:2]
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| 3 |
Other miRNAs from this paper: ssc-mir-122, ssc-mir-145, ssc-mir-29b-1, ssc-let-7c, ssc-mir-196a-2, ssc-mir-29c, ssc-let-7a-1, ssc-let-7e, ssc-mir-99a, ssc-mir-148b, ssc-mir-92b, ssc-mir-208b, ssc-mir-339-1, ssc-mir-362, ssc-mir-4332, ssc-mir-451, ssc-let-7a-2, ssc-mir-29b-2, ssc-mir-182, ssc-mir-196a-1, ssc-mir-339-2
Based on the RPKM values, the top four of the DE miRNAs were miR-let-7a, miR-99a, miR-374a-5p, and miR-148b-3p, whose sum of RPKM varied from approximately 2,035 to 9,865.
[score:1]
[1 to 20 of 1 sentences]
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| 4 |
Other miRNAs from this paper: ssc-mir-125b-2, ssc-mir-145, ssc-mir-23a, ssc-mir-24-1, ssc-mir-26a, ssc-mir-140, ssc-let-7c, ssc-let-7f-1, ssc-let-7i, ssc-mir-103-1, ssc-mir-21, ssc-mir-29c, ssc-let-7a-1, ssc-let-7e, ssc-let-7g, ssc-mir-30d, ssc-mir-199a-2, ssc-mir-423, ssc-mir-151, ssc-mir-10a, ssc-mir-10b, ssc-mir-486-1, ssc-mir-152, ssc-mir-103-2, ssc-mir-24-2, ssc-mir-23b, ssc-mir-99a, ssc-mir-125a, ssc-mir-92a-2, ssc-mir-92a-1, ssc-mir-192, ssc-mir-100, ssc-mir-374b, ssc-mir-532, ssc-mir-19b-2, ssc-mir-19b-1, ssc-mir-324, ssc-mir-125b-1, ssc-mir-194b, ssc-mir-362, ssc-mir-126, ssc-mir-199a-1, ssc-let-7a-2, ssc-mir-486-2, ssc-let-7d, ssc-let-7f-2, ssc-mir-31, ssc-mir-194a, ssc-mir-551a, ssc-mir-1468, ssc-mir-200b
This was the case of Bta-miR-193b, Ssc-miR-374a, Ssc-miR-145, Ssc-miR-362, and Hsa-miR-324-3p, that had a CN of 21, 13, 3, 0 and 0, respectively.
[score:1]
[1 to 20 of 1 sentences]
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| 5 |
Other miRNAs from this paper: hsa-let-7d, hsa-mir-16-1, hsa-mir-19a, hsa-mir-19b-1, hsa-mir-19b-2, hsa-mir-21, hsa-mir-22, hsa-mir-23a, hsa-mir-24-1, hsa-mir-24-2, hsa-mir-26a-1, hsa-mir-27a, hsa-mir-30a, hsa-mir-16-2, hsa-mir-192, hsa-mir-214, hsa-mir-215, hsa-mir-23b, hsa-mir-30b, hsa-mir-125b-1, hsa-mir-130a, hsa-mir-145, hsa-mir-125b-2, hsa-mir-126, hsa-mir-194-1, hsa-mir-155, hsa-mir-194-2, hsa-mir-26a-2, hsa-mir-374a, ssc-mir-125b-2, ssc-mir-145, ssc-mir-19a, ssc-mir-23a, ssc-mir-24-1, ssc-mir-26a, ssc-mir-214, ssc-mir-27a, ssc-mir-21, hsa-mir-488, hsa-mir-421, hsa-mir-374b, ssc-mir-16-2, ssc-mir-16-1, ssc-mir-30b, ssc-mir-130a, ssc-mir-215, ssc-mir-30a, ssc-mir-24-2, ssc-mir-23b, ssc-mir-192, ssc-mir-374b, ssc-mir-19b-2, ssc-mir-19b-1, ssc-mir-125b-1, ssc-mir-22, ssc-mir-194b, ssc-mir-155, ssc-mir-4331-1, ssc-mir-421, hsa-mir-23c, ssc-mir-126, ssc-let-7d, ssc-mir-194a, ssc-mir-4331-2
The precursor of miR-421, for example, was located on chromosome X and was clustered with the known miRNA ssc-miR-374a within a distance of 107 bp, while no obvious hairpin was detected in between (Table 2).
[score:1]
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