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3 publications mentioning aae-mir-9a-2

Open access articles that are associated with the species Aedes aegypti and mention the gene name mir-9a-2. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 11
Deep sequencing data revealed that in the nucleus of mosquito cells infected with Wolbachia, the expression of miR-1, miR-10 and miR263a-3p was suppressed and 11 other miRNAs were induced; miR-9a, miR-12-3p, miR-124, miR-125-5p, miR-282-5p, miR-308-5p, miR-932-3p, miR-965, miR-988-5p, miR-1000 and miR-1175-5p (Figure 8A). [score:5]
If we consider miRNA reads of the nucleus and the cytoplasm together, we identified a total of 83 miRNAs from which miR-210 and miR-932-5p were suppressed by the presence of Wolbachia and 12 were induced; miR-9a, miR-12-3p, miR-33, miR-79-3p, miR-124, miR-219, miR-286b, miR-308-5p, miR-932-3p, miR-965, miR-988-5p and miR-1000 (Figure 8C). [score:3]
In the cytoplasm, miR-11-5p, miR-92a-5p, miR-210, miR-932-5p and miR-1175-5p were suppressed and 14 miRNAs were induced; miR-1, miR-9a, miR-12-3p, miR-33, miR-34-3p, miR-79-3p, miR-124, miR-219, miR-252-5p, miR-286b, miR308-5p, miR-1000, miR-1889-3p and miR-1890 (Figure 8B). [score:3]
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2
[+] score: 10
miR-9a is expressed in all life stages examined and its expression is reduced in adults, which is consistent with what was observed in D. melanogaster [21]. [score:5]
When D. melanogaster data are available for comparison as in the cases of let-7 and miR-9a, similar expression profiles were found between An. [score:3]
Northern analysis using total RNA from 17-day old females with antisense Locked Nucleic Acid (LNA) probes against 4 selected miRNAs (miR-9a, -14, -210, and let-7) all showed bands of the correct size, confirming cloning results (Figure 1, the last lane). [score:1]
Shown here are eight northern blots performed using Dig-labeled miRCURY LNA probes designed for hybridization to either miR-14, let-7, miR-9a, miR-210, or to one of the four novel miRNAs (miR-x1–x4). [score:1]
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3
[+] score: 4
recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500 We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2]
recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2]
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