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sort by 3 publications mentioning aae-mir-9a-2 Open access articles that are associated with the species Aedes aegypti and mention the gene name mir-9a-2. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.
1	[+] score: 11 Other miRNAs from this paper: aae-mir-184, aae-mir-275, aae-mir-8, aae-mir-252, aae-bantam, aae-mir-71, aae-mir-276-1, aae-mir-317-1, aae-mir-92a, aae-mir-306, aae-mir-1889, aae-mir-278, aae-mir-989, aae-mir-14, aae-mir-11, aae-mir-1, aae-mir-34, aae-mir-1890, aae-mir-12, aae-mir-125, aae-mir-308, aae-mir-1175, aae-mir-1174, aae-mir-981, aae-mir-965, aae-mir-932, aae-mir-309a-1, aae-mir-309a-2, aae-mir-285, aae-mir-137-1, aae-mir-137-2, aae-mir-10, aae-mir-283, aae-mir-988, aae-mir-124, aae-mir-2940, aae-mir-2765, aae-mir-2941-1, aae-mir-2941-2, aae-mir-33, aae-mir-263a, aae-mir-100, aae-mir-970, aae-mir-210, aae-mir-79, aae-mir-1000-1, aae-mir-1000-2, aae-mir-219, aae-mir-276-2, aae-mir-282-1, aae-mir-282-2, aae-mir-286b-1, aae-mir-286b-2, aae-mir-317-2, aae-mir-309b, aae-mir-92b, aae-mir-9a-1 Deep sequencing data revealed that in the nucleus of mosquito cells infected with Wolbachia, the expression of miR-1, miR-10 and miR263a-3p was suppressed and 11 other miRNAs were induced; miR-9a, miR-12-3p, miR-124, miR-125-5p, miR-282-5p, miR-308-5p, miR-932-3p, miR-965, miR-988-5p, miR-1000 and miR-1175-5p (Figure 8A). [score:5] If we consider miRNA reads of the nucleus and the cytoplasm together, we identified a total of 83 miRNAs from which miR-210 and miR-932-5p were suppressed by the presence of Wolbachia and 12 were induced; miR-9a, miR-12-3p, miR-33, miR-79-3p, miR-124, miR-219, miR-286b, miR-308-5p, miR-932-3p, miR-965, miR-988-5p and miR-1000 (Figure 8C). [score:3] In the cytoplasm, miR-11-5p, miR-92a-5p, miR-210, miR-932-5p and miR-1175-5p were suppressed and 14 miRNAs were induced; miR-1, miR-9a, miR-12-3p, miR-33, miR-34-3p, miR-79-3p, miR-124, miR-219, miR-252-5p, miR-286b, miR308-5p, miR-1000, miR-1889-3p and miR-1890 (Figure 8B). [score:3] [1 to 20 of 3 sentences]
2	[+] score: 10 Other miRNAs from this paper: dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-8, dme-mir-9a, dme-mir-12, dme-mir-14, dme-mir-277, dme-mir-281-1, dme-mir-283, dme-mir-281-2, dme-mir-34, dme-mir-79, dme-mir-210, dme-mir-304, dme-mir-306, dme-mir-9b, dme-let-7, dme-mir-2c, aga-let-7, aga-mir-14, aga-mir-210, aga-mir-277, aga-mir-281, aga-mir-283, aga-mir-2-1, aga-mir-2-2, aga-mir-79, aga-mir-8, aga-mir-9a, aga-mir-9b, dme-mir-375, dme-mir-981, dme-mir-989, dme-mir-996, aga-mir-34, aga-mir-12, aga-mir-996, aga-mir-989, aga-mir-306, aga-mir-981, aga-mir-375, aae-mir-277, aae-mir-8, aae-mir-2a, aae-mir-306, aae-mir-281, aae-mir-989, aae-mir-14, aae-mir-34, aae-mir-996, aae-mir-12, aae-mir-981, aae-mir-283, aae-mir-210, aae-mir-79, aae-mir-375, aae-let-7, aae-mir-2b, aae-mir-2c, aae-mir-9a-1, aae-mir-9b, aga-mir-2b, aga-mir-2c miR-9a is expressed in all life stages examined and its expression is reduced in adults, which is consistent with what was observed in D. melanogaster [21]. [score:5] When D. melanogaster data are available for comparison as in the cases of let-7 and miR-9a, similar expression profiles were found between An. [score:3] Northern analysis using total RNA from 17-day old females with antisense Locked Nucleic Acid (LNA) probes against 4 selected miRNAs (miR-9a, -14, -210, and let-7) all showed bands of the correct size, confirming cloning results (Figure 1, the last lane). [score:1] Shown here are eight northern blots performed using Dig-labeled miRCURY LNA probes designed for hybridization to either miR-14, let-7, miR-9a, miR-210, or to one of the four novel miRNAs (miR-x1–x4). [score:1] [1 to 20 of 4 sentences]
3	[+] score: 4 Other miRNAs from this paper: aga-let-7, aga-mir-1, aga-mir-263a, aga-mir-278, aga-mir-282, aga-mir-9a, aga-mir-92b, aga-mir-9b, aga-mir-1175, aga-mir-34, aga-mir-12, aga-mir-11, aga-mir-1889, aga-mir-375, aga-mir-1890, aga-mir-1891, aae-mir-252, aae-mir-1889, aae-mir-278, aae-mir-11, aae-mir-1, aae-mir-34, aae-mir-1890, aae-mir-12, aae-mir-1891-1, aae-mir-1891-2, aae-mir-1175, aae-mir-285, aae-mir-31, aae-mir-2940, aae-mir-33, aae-mir-263a, aae-mir-375, aae-let-7, aae-mir-2944b, aae-mir-282-1, aae-mir-282-2, aae-mir-2945, aae-mir-92b, aae-mir-9a-1, aae-mir-9b, cqu-mir-1, cqu-let-7, cqu-mir-252-1, cqu-mir-278, cqu-mir-1175, cqu-mir-12, cqu-mir-11, cqu-mir-285, cqu-mir-1891, cqu-mir-31, cqu-mir-1890, cqu-mir-33, cqu-mir-1889, cqu-mir-375-1, cqu-mir-252-2, cqu-mir-375-2, aga-mir-2944b, aga-mir-2945, aga-mir-285, aga-mir-33, aga-mir-31 recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500 We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2] recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2] [1 to 20 of 2 sentences]

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3 publications mentioning aae-mir-9a-2

Open access articles that are associated with the species Aedes aegypti and mention the gene name mir-9a-2. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

[+] score: 11

Deep sequencing data revealed that in the nucleus of mosquito cells infected with Wolbachia, the expression of miR-1, miR-10 and miR263a-3p was suppressed and 11 other miRNAs were induced; miR-9a, miR-12-3p, miR-124, miR-125-5p, miR-282-5p, miR-308-5p, miR-932-3p, miR-965, miR-988-5p, miR-1000 and miR-1175-5p (Figure 8A). [score:5]

If we consider miRNA reads of the nucleus and the cytoplasm together, we identified a total of 83 miRNAs from which miR-210 and miR-932-5p were suppressed by the presence of Wolbachia and 12 were induced; miR-9a, miR-12-3p, miR-33, miR-79-3p, miR-124, miR-219, miR-286b, miR-308-5p, miR-932-3p, miR-965, miR-988-5p and miR-1000 (Figure 8C). [score:3]

In the cytoplasm, miR-11-5p, miR-92a-5p, miR-210, miR-932-5p and miR-1175-5p were suppressed and 14 miRNAs were induced; miR-1, miR-9a, miR-12-3p, miR-33, miR-34-3p, miR-79-3p, miR-124, miR-219, miR-252-5p, miR-286b, miR308-5p, miR-1000, miR-1889-3p and miR-1890 (Figure 8B). [score:3]

[1 to 20 of 3 sentences]

[+] score: 10

Other miRNAs from this paper: dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-8, dme-mir-9a, dme-mir-12, dme-mir-14, dme-mir-277, dme-mir-281-1, dme-mir-283, dme-mir-281-2, dme-mir-34, dme-mir-79, dme-mir-210, dme-mir-304, dme-mir-306, dme-mir-9b, dme-let-7, dme-mir-2c, aga-let-7, aga-mir-14, aga-mir-210, aga-mir-277, aga-mir-281, aga-mir-283, aga-mir-2-1, aga-mir-2-2, aga-mir-79, aga-mir-8, aga-mir-9a, aga-mir-9b, dme-mir-375, dme-mir-981, dme-mir-989, dme-mir-996, aga-mir-34, aga-mir-12, aga-mir-996, aga-mir-989, aga-mir-306, aga-mir-981, aga-mir-375, aae-mir-277, aae-mir-8, aae-mir-2a, aae-mir-306, aae-mir-281, aae-mir-989, aae-mir-14, aae-mir-34, aae-mir-996, aae-mir-12, aae-mir-981, aae-mir-283, aae-mir-210, aae-mir-79, aae-mir-375, aae-let-7, aae-mir-2b, aae-mir-2c, aae-mir-9a-1, aae-mir-9b, aga-mir-2b, aga-mir-2c

miR-9a is expressed in all life stages examined and its expression is reduced in adults, which is consistent with what was observed in D. melanogaster [21]. [score:5]

When D. melanogaster data are available for comparison as in the cases of let-7 and miR-9a, similar expression profiles were found between An. [score:3]

Northern analysis using total RNA from 17-day old females with antisense Locked Nucleic Acid (LNA) probes against 4 selected miRNAs (miR-9a, -14, -210, and let-7) all showed bands of the correct size, confirming cloning results (Figure 1, the last lane). [score:1]

Shown here are eight northern blots performed using Dig-labeled miRCURY LNA probes designed for hybridization to either miR-14, let-7, miR-9a, miR-210, or to one of the four novel miRNAs (miR-x1–x4). [score:1]

[1 to 20 of 4 sentences]

[+] score: 4

Other miRNAs from this paper: aga-let-7, aga-mir-1, aga-mir-263a, aga-mir-278, aga-mir-282, aga-mir-9a, aga-mir-92b, aga-mir-9b, aga-mir-1175, aga-mir-34, aga-mir-12, aga-mir-11, aga-mir-1889, aga-mir-375, aga-mir-1890, aga-mir-1891, aae-mir-252, aae-mir-1889, aae-mir-278, aae-mir-11, aae-mir-1, aae-mir-34, aae-mir-1890, aae-mir-12, aae-mir-1891-1, aae-mir-1891-2, aae-mir-1175, aae-mir-285, aae-mir-31, aae-mir-2940, aae-mir-33, aae-mir-263a, aae-mir-375, aae-let-7, aae-mir-2944b, aae-mir-282-1, aae-mir-282-2, aae-mir-2945, aae-mir-92b, aae-mir-9a-1, aae-mir-9b, cqu-mir-1, cqu-let-7, cqu-mir-252-1, cqu-mir-278, cqu-mir-1175, cqu-mir-12, cqu-mir-11, cqu-mir-285, cqu-mir-1891, cqu-mir-31, cqu-mir-1890, cqu-mir-33, cqu-mir-1889, cqu-mir-375-1, cqu-mir-252-2, cqu-mir-375-2, aga-mir-2944b, aga-mir-2945, aga-mir-285, aga-mir-33, aga-mir-31

recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500 We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2]

recognition sites Mean MFE (Kcal/Mol) Recognition site start position on lincRNA_1317 miR-278-5p 5 -22.40 307, 749, 1112, 1260, 1491 miR-252-3p 4 -21.15 162, 629, 1560, 3946 miR-11-5p 3 -21.67 2248, 2286, 3328 miR-1890 3 -21.17 1489, 2712, 3602 miR-263a-3p 3 -21.47 2208, 2545, 3336 miR-33 3 -24.90 1545, 1810, 2669 miR-34-5p 3 -25.03 1020, 1232, 1379 miR-9b 3 -24.03 2034, 2891, 3603 let-7 2 -22.20 2747, 2817 miR-1 2 -22.80 1165, 2528 miR-1175-3p 2 -20.65 1489, 3274 miR-12-5p 2 -25.60 632, 1575 miR-1889-3p 2 -20.80 1268, 3988 miR-1891 2 -21.10 162, 2349 miR-282-5p 2 -25.70 1232, 1297 miR-2944b-3p 2 -22.05 1255, 3797 miR-2945-5p 2 -23.00 770, 1209 miR-31 2 -25.70 819, 871 miR-375 2 -22.25 66, 3293 miR-92b-5p 2 -23.05 1042, 3788 miR-9a 2 -20.65 170, 3500We also used LncTar algorithm to predict any direct interaction between lincRNA_1317 and DENV-2 genome. [score:2]

[1 to 20 of 2 sentences]

miRBase

3 publications mentioning aae-mir-9a-2