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5 publications mentioning chi-mir-493

Open access articles that are associated with the species Capra hircus and mention the gene name mir-493. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 12
The known miRNA and novel miRNA were analyzed for differential expression levels: twenty miRNA genes were significantly differentially expressed, evaluated both by fold change and corrected significance level (q < 0.05); these differential miRNA genes were novel_128, which was over-expressed, and chi-miR-335-3p, chi-miR-411a-3p, chi-miR-493-5p, and chi-miR-543-3p, which were under-expressed. [score:7]
qRT-qPCR analysis with U6 as housekeeping gen indicated that the expression of chi-miR-335-3p, chi-miR-493-5p, chi-miR-543-3p and chi-miR-411a-3p had decreasing trends (P < 0.05), and the expression of novel_128 was increased (P < 0.05) in the pubescent goats compared to prepubescent goats (Fig.   5); these data were consistent with the Solexa sequencing results, which indicates that these miRNAs may be involved in regulating the onest of puberty. [score:5]
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2
[+] score: 12
The top 10 most significantly differentially expressed miRNAs (miR-21, miR-199b, miR-199c, miR-127, miR-200a, miR-379, miR-200b, miR-204, miR-411a, miR-493) were analysed. [score:3]
The top 10 most significantly differentially expressed miRNAs were miR-21, miR-199b, miR-199c, miR-127, miR-200a, miR-379, miR-200b, miR-204, miR-411a, and miR-493. [score:3]
Recently, the BMPR1B gene has been reported to be regulated by chi-miR-493-3p alone [21]. [score:2]
miR-21, miR-99a, miRNA-143, let-7f, miR-493 and miR-200b may play important roles in follicular development. [score:2]
The expression level of miR-493-3p was also higher in ovaries of polytocous compared with monotocous goats 19, 21. [score:2]
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3
[+] score: 11
Other miRNAs from this paper: chi-mir-126, chi-mir-24, chi-mir-365
Note: A, known pre-miRNA and secondary structure pictures of oar-mir-493; B, known pre-miRNA and secondary structure pictures of bta-mir-493; C, known pre-miRNA and secondary structure pictures of bta-mir-365-1. Compared to the Uni library, 26,187 up-regulated and 157,567 down-regulated lncRNAs were identified in the Mul library (Fig 3). [score:6]
Bta-mir-365-1, cfa-mir-493, and bta-mir-493 are precursors of TCONS_00284825, whereas oar-mir-493 is the precursor of TCONS_00320849, which the identities were 100%. [score:1]
0183163.g002 Fig 2 Note: A, known pre-miRNA and secondary structure pictures of oar-mir-493; B, known pre-miRNA and secondary structure pictures of bta-mir-493; C, known pre-miRNA and secondary structure pictures of bta-mir-365-1. To better annotate the novel lncRNA from an evolutionary standpoint, we classified all of the predicted novel lncRNAs into different non-coding RNA families using INFERNAL. [score:1]
Bta-mir-365-1, cfa-mir-493 [37], and bta-mir-493 [38] are precursors of TCONS_00284825 and oar-mir-493 [39] is a precursor of TCONS_00320849 in pre-miRNA prediction. [score:1]
0183163.g002 Fig 2 Note: A, known pre-miRNA and secondary structure pictures of oar-mir-493; B, known pre-miRNA and secondary structure pictures of bta-mir-493; C, known pre-miRNA and secondary structure pictures of bta-mir-365-1. To better annotate the novel lncRNA from an evolutionary standpoint, we classified all of the predicted novel lncRNAs into different non-coding RNA families using INFERNAL. [score:1]
The pre-miRNA and secondary structure of oar-mir-493, bta-mir-493 and bta-mir-365-1.. [score:1]
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4
[+] score: 4
The BMPR1B gene, which is regulated by chi-miR-493-3P alone, is a very important finding. [score:2]
The BMPR1B gene, which is regulated by chi-miR-493-3P alone, was a very important finding. [score:2]
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5
[+] score: 1
Other miRNAs from this paper: mmu-mir-1a-1, mmu-mir-127, mmu-mir-134, mmu-mir-136, mmu-mir-154, mmu-mir-181a-2, mmu-mir-143, mmu-mir-196a-1, mmu-mir-196a-2, mmu-mir-21a, rno-mir-329, mmu-mir-329, mmu-mir-1a-2, mmu-mir-181a-1, mmu-mir-181b-1, mmu-mir-181c, mmu-mir-375, mmu-mir-379, mmu-mir-181b-2, rno-mir-21, rno-mir-127, rno-mir-134, rno-mir-136, rno-mir-143, rno-mir-154, rno-mir-181c, rno-mir-181a-2, rno-mir-181b-1, rno-mir-181b-2, rno-mir-196a, rno-mir-181a-1, mmu-mir-196b, rno-mir-196b-1, mmu-mir-412, mmu-mir-370, oar-mir-431, oar-mir-127, oar-mir-432, oar-mir-136, mmu-mir-431, mmu-mir-433, rno-mir-431, rno-mir-433, ssc-mir-181b-2, ssc-mir-181c, ssc-mir-136, ssc-mir-196a-2, ssc-mir-21, rno-mir-370, rno-mir-412, rno-mir-1, mmu-mir-485, mmu-mir-541, rno-mir-541, rno-mir-493, rno-mir-379, rno-mir-485, mmu-mir-668, bta-mir-21, bta-mir-181a-2, bta-mir-127, bta-mir-181b-2, bta-mir-181c, mmu-mir-181d, mmu-mir-493, rno-mir-181d, rno-mir-196c, rno-mir-375, mmu-mir-1b, bta-mir-1-2, bta-mir-1-1, bta-mir-134, bta-mir-136, bta-mir-143, bta-mir-154a, bta-mir-181d, bta-mir-196a-2, bta-mir-196a-1, bta-mir-196b, bta-mir-329a, bta-mir-329b, bta-mir-370, bta-mir-375, bta-mir-379, bta-mir-412, bta-mir-431, bta-mir-432, bta-mir-433, bta-mir-485, bta-mir-493, bta-mir-541, bta-mir-181a-1, bta-mir-181b-1, ssc-mir-1, ssc-mir-181a-1, mmu-mir-432, rno-mir-668, ssc-mir-143, ssc-mir-181a-2, ssc-mir-181b-1, ssc-mir-181d, ssc-mir-196b-1, ssc-mir-127, ssc-mir-432, oar-mir-21, oar-mir-181a-1, oar-mir-493, oar-mir-433, oar-mir-370, oar-mir-379, oar-mir-329b, oar-mir-329a, oar-mir-134, oar-mir-668, oar-mir-485, oar-mir-154a, oar-mir-154b, oar-mir-541, oar-mir-412, mmu-mir-21b, mmu-mir-21c, ssc-mir-196a-1, ssc-mir-196b-2, ssc-mir-370, ssc-mir-493, bta-mir-154c, bta-mir-154b, oar-mir-143, oar-mir-181a-2, chi-mir-1, chi-mir-127, chi-mir-134, chi-mir-136, chi-mir-143, chi-mir-154a, chi-mir-154b, chi-mir-181b, chi-mir-181c, chi-mir-181d, chi-mir-196a, chi-mir-196b, chi-mir-21, chi-mir-329a, chi-mir-329b, chi-mir-379, chi-mir-412, chi-mir-432, chi-mir-433, chi-mir-485, rno-mir-196b-2, bta-mir-668, ssc-mir-375
Other families that had a high abundance of reads were miR-134, miR-136, miR-154, miR-370, miR-412, miR-431, miR-432, miR-433, miR-485, miR-493, miR-541; a total of 11 miRNA families. [score:1]
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