Stem-loop rno-mir-292

Accession

MI0000966

Description

Rattus norvegicus rno-mir-292 precursor miRNA

Literature search

3 open access papers mention rno-mir-292
(3 sentences)

Sequence

247 reads, 11 reads per million, 53 experiments

caaccugugauACUCAAACUGGGGGCUCUUUUGgguuuucuuuggaagaaAAGUGCCGCCAGGUUUUGAGUGUuaccgauug
(((.(.((((((((((((((((.(((.((((....(((((....))))))))).))).))))..)))))))))))).).)))

Structure

   c u            --    G   U    UGgg     u 
caa c gugauACUCAAA  CUGG GGC CUUU    uuuuc u
||| | ||||||||||||  |||| ||| ||||    |||||  
guu g cauUGUGAGUUU  GACC CCG GAAa    agaag u
   a c            UG    G   U    ----     g 

Annotation confidence High

Genome context

chr1: 64538119-64538200 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rno-mir-292

Mature rno-miR-292-5p

• Accession: MIMAT0000896
• Description: Rattus norvegicus rno-miR-292-5p mature miRNA
• Sequence: 12 - ACUCAAACUGGGGGCUCUUUUG - 33
• Evidence: not_experimental

Mature rno-miR-292-3p

• Accession: MIMAT0000897
• Description: Rattus norvegicus rno-miR-292-3p mature miRNA
• Sequence: 51 - AAGUGCCGCCAGGUUUUGAGUGU - 73
• Evidence: experimental ; SOLiD [2]

References

1. PubMed ID: 12919684
   Embryonic stem cell-specific MicroRNAs
   "Houbaviy HB, Murray MF, Sharp PA"
   "Dev Cell (2003) 5:351-358


2. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249