Stem-loop fru-mir-27b

Accession

MI0003267

Description

Fugu rubripes fru-mir-27b precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

aggcacagagcuuagcugauuggugaacagugauugauuuccucuuugUUCACAGUGGCUAAGUUCUGCAccug
(((..((((((((((((.((((.(((((((.((.........)).)))))))))))))))))))))))..))).

Structure

-   ca            g    g       u  uug 
 agg  cagagcuuagcu auug ugaacag ga   a
 |||  |||||||||||| |||| ||||||| ||   u
 ucc  GUCUUGAAUCGG UGAC ACUUguu cu   u
g   AC            -    -       u  ccu 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602555.1: 7173222-7173295 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-27b

Mature fru-miR-27b

• Accession: MIMAT0002951
• Description: Fugu rubripes fru-miR-27b mature miRNA
• Sequence: 49 - UUCACAGUGGCUAAGUUCUGCA - 70
• Evidence: not_experimental

References