Stem-loop tni-mir-216a

Accession

MI0003292

Description

Tetraodon nigroviridis tni-mir-216a precursor miRNA

Sequence

uuggugAAAUCUCAGCUGGCAACUGUGAgucguucacuagcugcucucacaauggccucugggauuaugcuaa
.(((((.((((((((..(((...((((((..((.........)).))))))...))).)))))))).))))).

Structure

u     A        CU   AAC      uc  uca 
 uggug AAUCUCAG  GGC   UGUGAg  gu   c
 ||||| ||||||||  |||   ||||||  ||   u
 aucgu uuaggguc  ccg   acacuc  cg   a
a     a        -u   gua      -u  ucg 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

17: 5747758-5747830 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-216a

Mature tni-miR-216a

• Accession: MIMAT0002974
• Description: Tetraodon nigroviridis tni-miR-216a mature miRNA
• Sequence: 7 - AAAUCUCAGCUGGCAACUGUGA - 28
• Evidence: not_experimental

References