Stem-loop tni-mir-429

Accession

MI0003302

Description

Tetraodon nigroviridis tni-mir-429 precursor miRNA

Sequence

agccuguugauaggcgucuuaccagacaugguuagauguaauuauuguugucUAAUACUGUCUGGUAAUGCCGUccauuaaauggca
.(((..(((((.((((.(((((((((((..((((((((..........))))))))..)))))))))).).)))).)))))..))).

Structure

a   ug     a    u -          ug        uaau 
 gcc  uugau ggcg c uuaccagaca  guuagaug    u
 |||  ||||| |||| | ||||||||||  ||||||||     
 cgg  aauua cUGC G AAUGGUCUGU  UAAUcugu    a
a   ua     c    C U          CA        uguu 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

Un_random: 2992653-2992739 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-429

Mature tni-miR-429

• Accession: MIMAT0002980
• Description: Tetraodon nigroviridis tni-miR-429 mature miRNA
• Sequence: 53 - UAAUACUGUCUGGUAAUGCCGU - 74
• Evidence: not_experimental

References