Stem-loop fru-mir-181b

Accession

MI0003331

Description

Fugu rubripes fru-mir-181b precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

aaaggucacaaucAACAUUCAUUGCUGUCGGUGGGuuuaacuguauggaagagcucacugaacgaugaaugcaacugugucccagau
...((.((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))).)).....

Structure

--aaa  u    aucAA         CUG           aa  g 
     gg caca     CAUUCAUUG   UCGGUGGGuuu  cu u
     || ||||     |||||||||   |||||||||||  ||  
     cc gugu     guaaguagc   agucacucgag  gg a
uagac  u    -caac         --a           aa  u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602554.1: 9659865-9659951 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-181b

Mature fru-miR-181b

• Accession: MIMAT0003003
• Description: Fugu rubripes fru-miR-181b mature miRNA
• Sequence: 14 - AACAUUCAUUGCUGUCGGUGGG - 35
• Evidence: not_experimental

References