Stem-loop tni-mir-199-1

Accession

MI0003359

Description

Tetraodon nigroviridis tni-mir-199-1 precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

ccggcuccguccaCCCAGUGUUCAGACUACCUGUUCauugucauacugguguacaguagucugcacauugguuagacugggcacgg
(((((((.(((...(((((((.((((((((.(((.((((........)))).))))))))))).)))))))...))).)))).)))

Structure

   -    c   caC       U        C   U    guc 
ccg gcuc guc   CCAGUGU CAGACUAC UGU Cauu   a
||| |||| |||   ||||||| |||||||| ||| ||||    
ggc cggg cag   gguuaca gucugaug aca gugg   u
   a    u   auu       c        -   u    uca 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

15: 2934170-2934255 [+]

Mature tni-miR-199

• Accession: MIMAT0002960
• Description: Tetraodon nigroviridis tni-miR-199 mature miRNA
• Sequence: 14 - CCCAGUGUUCAGACUACCUGUUC - 36
• Evidence: not_experimental

References