Stem-loop fru-mir-107

Accession

MI0003379

Description

Fugu rubripes fru-mir-107 precursor miRNA

Gene family

MIPF0000024; mir-103

Sequence

cucccugcucucagccucuuuacggugcugccuuguggcaucuugaucaAGCAGCAUUGUACAGGGCUAUGAaggc
...(((..((..((((.((.(((((((((((.(((............)))))))))))))).))))))..))))).

Structure

cuc   gc  uc    u  u           c   uggca 
   ccu  uc  agcc cu uacggugcugc uug     u
   |||  ||  |||| || ||||||||||| |||      
   gga  AG  UCGG GA AUGUUACGACG Aac     c
--c   --  UA    -  C           -   uaguu 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602536.1: 11331215-11331290 [+]

Mature fru-miR-107

• Accession: MIMAT0003043
• Description: Fugu rubripes fru-miR-107 mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUGA - 72
• Evidence: not_experimental

References