Stem-loop fru-mir-100

Accession

MI0003409

Description

Fugu rubripes fru-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

cacaAACCCGUAGAUCCGAACUUGUGgugacuggccgcacaagcucguaucuauagguaugug
((((.(((.((((((.(((.((((((.((......)))))))).))).)))))).))).))))

Structure

    A   C      C   A      g  ac 
caca ACC GUAGAU CGA CUUGUG ug  u
|||| ||| |||||| ||| |||||| ||   
gugu ugg uaucua gcu gaacac gc  g
    a   a      u   c      -  cg 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602549.1: 9610912-9610974 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fru-mir-100

Mature fru-miR-100

• Accession: MIMAT0003063
• Description: Fugu rubripes fru-miR-100 mature miRNA
• Sequence: 5 - AACCCGUAGAUCCGAACUUGUG - 26
• Evidence: not_experimental

References