Stem-loop tni-mir-23a-3

Accession

MI0003430

Description

Tetraodon nigroviridis tni-mir-23a-3 precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

ucuguuggccaggggaauuccuggcagagugauuuuugagacuacaggacugaAUCACAUUGCCAGGGAUUUCCAauggcu
......(((((.(((((((((((((((.(((((((................))))))).)))))))))))))))..)))))

Structure

ucuguu     -g               a       uugagac 
      ggcca  gggaauuccuggcag gugauuu       u
      |||||  ||||||||||||||| |||||||        
      ucggu  CCUUUAGGGACCGUU CACUAag       a
------     aA               A       ucaggac 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

3: 8969961-8970041 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tni-mir-23a-3

Mature tni-miR-23a

• Accession: MIMAT0002913
• Description: Tetraodon nigroviridis tni-miR-23a mature miRNA
• Sequence: 54 - AUCACAUUGCCAGGGAUUUCCA - 75
• Evidence: not_experimental

References