Stem-loop xtr-mir-99

Accession

MI0004821

Description

Xenopus tropicalis xtr-mir-99 precursor miRNA

Sequence

uaacauaAACCCGUAGAUCCGAUCUUGUGgugaauuccuuugcucaagcucguuucuaugggucuguguca
..(((((.(((((((((..(((.((((.((((((....)))))))))).)))..))))))))).)))))..

Structure

ua     A         UC   U    U      u 
  acaua ACCCGUAGA  CGA CUUG Ggugaa u
  ||||| |||||||||  ||| |||| ||||||  
  ugugu uggguaucu  gcu gaac ucguuu c
ac     c         uu   c    -      c 

Annotation confidence Not enough data

Genome context

chr2: 23121034-23121104 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-99

Mature xtr-miR-99

• Accession: MIMAT0003582
• Description: Xenopus tropicalis xtr-miR-99 mature miRNA
• Sequence: 8 - AACCCGUAGAUCCGAUCUUGUG - 29
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 18032731
   Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
   "Tang GQ, Maxwell ES"
   "Genome Res (2008) 18:104-112