Stem-loop bta-mir-331

Accession

MI0005463

Description

Bos taurus bta-mir-331 precursor miRNA mir-331

Gene
family

RF00769; mir-331

Literature search

3 open access papers mention bta-mir-331
(12 sentences)

Sequence

6937 reads, 134 reads per million, 70 experiments

gaguuugguuuuguuuggguuuguUCUAGGUAUGGUCCCAGGgaucccagaucaaaccagGCCCCUGGGCCUAUCCUAGAAccaaccuaa
..............(((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))

Structure

gaguuugguuuugu       u        U    U       auc  agau 
              uuggguu guUCUAGG AUGG CCCAGGg   cc    c
              ||||||| |||||||| |||| |||||||   ||    a
              aauccaa cAAGAUCC UAUC GGGUCCC   Gg    a
--------------       c        -    C       --C  acca 

Annotation confidence High

Genome context

chr5: 25155269-25155358 [+]

Mature bta-miR-331-3p

• Accession: MIMAT0004339
• Description: Bos taurus bta-miR-331-3p mature miRNA
• Sequence: 61 - GCCCCUGGGCCUAUCCUAGAA - 81
• Evidence: experimental ; cloned [1], Illumina [2]

Mature bta-miR-331-5p

• Accession: MIMAT0026716
• Description: Bos taurus bta-miR-331-5p mature miRNA
• Sequence: 25 - UCUAGGUAUGGUCCCAGG - 42
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103