Stem-loop bta-mir-660

Accession

MI0005468

Description

Bos taurus bta-mir-660 precursor miRNA mir-660

Gene
family

RF04285; mir-660

Literature search

2 open access papers mention bta-mir-660
(5 sentences)

Sequence

81796 reads, 1229 reads per million, 77 experiments

cugcuccuucucccgUACCCAUUGCAUAUCGGAGCUGugaauucucaaagcaccuccuaugugcauggauuacaggaggg
........(((((.(((.((((.((((((.((((.(((...........))).)))).))))))))))..))).))))).

Structure

cugcuccu     c   -C    U      C    C   gaau 
        ucucc gUA  CCAU GCAUAU GGAG UGu    u
        ||||| |||  |||| |||||| |||| |||    c
        ggagg cau  ggua cgugua ccuc acg    u
-------g     a   ua    -      u    c   aaac 

Annotation confidence Not enough data

Genome context

chrX: 93950762-93950841 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-660

Mature bta-miR-660

• Accession: MIMAT0004344
• Description: Bos taurus bta-miR-660 mature miRNA
• Sequence: 16 - UACCCAUUGCAUAUCGGAGCUG - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988