Stem-loop dme-mir-966

Accession

MI0005822

Description

Drosophila melanogaster dme-mir-966 precursor miRNA

Literature search

2 open access papers mention dme-mir-966
(4 sentences)

Sequence

1462 reads, 40 reads per million, 49 experiments

aaccugauccgcugcUGUGGGUUGUGGGCUGUGUGGcugugguauaggugCCGCCAGUUGAUAACCCCCAGCgugggcacggaccca
..((((.(((((.((((.(((((((.(((((.(((((............)))))))))).))))))).))))))))))).)).....

Structure

---aa  -  a     u    U       G     U     ugugg 
     cc ug uccgc gcUG GGGUUGU GGCUG GUGGc     u
     || || ||||| |||| ||||||| ||||| |||||      
     gg ac gggug CGAC CCCAAUA UUGAC CGCCg     a
accca  c  -     -    C       G     -     uggau 

Annotation confidence High

Genome context

chr2L: 6045627-6045713 [-]

Mature dme-miR-966-5p

• Accession: MIMAT0005481
• Description: Drosophila melanogaster dme-miR-966-5p mature miRNA
• Sequence: 16 - UGUGGGUUGUGGGCUGUGUGG - 36
• Evidence: experimental ; 454 [1]

Mature dme-miR-966-3p

• Accession: MIMAT0020862
• Description: Drosophila melanogaster dme-miR-966-3p mature miRNA
• Sequence: 51 - CCGCCAGUUGAUAACCCCCAGC - 72
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864