Stem-loop oan-mir-92a-1

Accession

MI0006697

Description

Ornithorhynchus anatinus oan-mir-92a-1 precursor miRNA

Sequence

31961 reads, 666 reads per million, 5 experiments

aucugagaagguuuugcacugauuccuccauGGGUGGGGAUUUGUUGCAUUACUuguagcuauguuuagagUAUUGCACUUGUCCCGGCCUGUggagggaaggaggacuugucaucaggu
(((((((((((((((.(.((..(((((((((((((.(((((..((.(((.(((((..(((...)))..))))).)))))..))))).))))))))))))))))))))))).)).))))))

Structure

      -  -       g a  ga             G     UU  U   U     gu   u 
aucuga ga agguuuu c cu  uuccuccauGGGU GGGAU  GU GCA UACUu  agc  
|||||| || ||||||| | ||  ||||||||||||| |||||  || ||| |||||  ||| a
uggacu cu uucagga g ga  agggaggUGUCCG CCCUG  CA CGU AUgag  uug  
      a  g       - -  --             G     UU  -   U     au   u 

Annotation confidence Not enough data

Genome context

6: 8561691-8561810 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from oan-mir-92a-1

Mature oan-miR-92a-1-5p

• Accession: MIMAT0006857
• Description: Ornithorhynchus anatinus oan-miR-92a-1-5p mature miRNA
• Sequence: 32 - GGGUGGGGAUUUGUUGCAUUACU - 54
• Evidence: experimental ; Illumina [1]

Mature oan-miR-92a-3p

• Accession: MIMAT0006858
• Description: Ornithorhynchus anatinus oan-miR-92a-3p mature miRNA
• Sequence: 72 - UAUUGCACUUGUCCCGGCCUGU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004