Stem-loop oan-mir-363

Accession

MI0006698

Description

Ornithorhynchus anatinus oan-mir-363 precursor miRNA

Sequence

30911 reads, 811 reads per million, 5 experiments

guuuugcuguuguCGGGUGGAUCACGAUGCAAUUUugauuaguuuaguaggagaaaAAUUGCACGGUAUCCAUCUGUaaaccgcaggac
(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).)))))))

Structure

       u   gu         CA  A         --ga   gu 
guuuugc guu  CGGGUGGAU  CG UGCAAUUUu    uua  u
||||||| |||  |||||||||  || |||||||||    |||   
caggacg caa  GUCUACCUA  GC ACGUUAAaa    gau  u
       c   aU         UG  -         agag   ga 

Annotation confidence High

Genome context

6: 8561848-8561936 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from oan-mir-363

Mature oan-miR-363-5p

• Accession: MIMAT0006859
• Description: Ornithorhynchus anatinus oan-miR-363-5p mature miRNA
• Sequence: 14 - CGGGUGGAUCACGAUGCAAUUU - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-363-3p

• Accession: MIMAT0006860
• Description: Ornithorhynchus anatinus oan-miR-363-3p mature miRNA
• Sequence: 57 - AAUUGCACGGUAUCCAUCUGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004