Stem-loop oan-mir-205

Accession

MI0006703

Description

Ornithorhynchus anatinus oan-mir-205 precursor miRNA

Sequence

26 reads, 1 reads per million, 4 experiments

gaauucggaacgauccauggguuucuguugUCCUUCAUUCCACCGGAGUCUguuucguaccuaaucaGAUUUCAGUGGAGUGAAGCACAagaggcauggaguugaauc
..........(((((((((....(((.((((.(((((((((((.((((((((.............)))))))).))))))))))).)))).))))))))).)))....

Structure

gaauucggaa   -      gguu   g    C           C        uuucg 
          cga uccaug    ucu uugU CUUCAUUCCAC GGAGUCUg     u
          ||| ||||||    ||| |||| ||||||||||| ||||||||     a
          guu agguac    gga aACA GAAGUGAGGUG CUUUAGac     c
------cuaa   g      ----   g    C           A        uaauc 

Annotation confidence Not enough data

Genome context

7: 39687501-39687608 [+]

Mature oan-miR-205-5p

• Accession: MIMAT0006866
• Description: Ornithorhynchus anatinus oan-miR-205-5p mature miRNA
• Sequence: 31 - UCCUUCAUUCCACCGGAGUCU - 51
• Evidence: experimental ; Illumina [1]

Mature oan-miR-205-3p

• Accession: MIMAT0006867
• Description: Ornithorhynchus anatinus oan-miR-205-3p mature miRNA
• Sequence: 68 - GAUUUCAGUGGAGUGAAGCACA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004