Stem-loop oan-mir-128-1

Accession

MI0006787

Description

Ornithorhynchus anatinus oan-mir-128-1 precursor miRNA

Sequence

85241 reads, 1498 reads per million, 5 experiments

gcuggauucggggccgauacacggucugagggguuuacgagucUCACAGUGAACCGGUCUCUUUuucaguu
((((((...(((((((...(((....(((((..........)))))..)))...)))))))...)))))).

Structure

-      uuc       aua   gguc     gguu 
 gcugga   ggggccg   cac    ugagg    u
 ||||||   |||||||   |||    |||||     
 ugacuu   CUCUGGC   GUG    ACUcu    a
u      UUU       CAA   --AC     gagc 

Annotation confidence Not enough data

Genome context

Contig290019: 34-104 [-]

Mature oan-miR-128-3p

• Accession: MIMAT0007006
• Description: Ornithorhynchus anatinus oan-miR-128-3p mature miRNA
• Sequence: 44 - UCACAGUGAACCGGUCUCUUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004