Stem-loop oan-mir-150

Accession

MI0006840

Description

Ornithorhynchus anatinus oan-mir-150 precursor miRNA

Sequence

11331 reads, 200 reads per million, 5 experiments

cgccccucggcgcccccUCUCCCAACCCUUGUACCAGAGcauaaacugaaccCCUGGUACGGGGCCGUGGGAGAGggggagccggggccccgcg
.(((((..(((.((((((((((((..(((((((((((................)))))))))))...)))))))))))).))))))))......

Structure

-----c     uc   g            -AC           AGcauaa 
      gcccc  ggc cccccUCUCCCA   CCUUGUACCAG       a
      |||||  ||| ||||||||||||   |||||||||||        
      cgggg  ccg ggggGAGAGGGU   GGGGCAUGGUC       c
gcgccc     --   a            GCC           Cccaagu 

Annotation confidence High

Genome context

Contig7207: 1834-1927 [+]

Mature oan-miR-150-5p

• Accession: MIMAT0007090
• Description: Ornithorhynchus anatinus oan-miR-150-5p mature miRNA
• Sequence: 18 - UCUCCCAACCCUUGUACCAGAG - 39
• Evidence: experimental ; Illumina [1]

Mature oan-miR-150-3p

• Accession: MIMAT0007091
• Description: Ornithorhynchus anatinus oan-miR-150-3p mature miRNA
• Sequence: 53 - CCUGGUACGGGGCCGUGGGAGAG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004