Stem-loop oan-mir-107

Accession

MI0006857

Description

Ornithorhynchus anatinus oan-mir-107 precursor miRNA

Sequence

4477 reads, 97 reads per million, 5 experiments

cuucucuuugcuuucAGCUUCUUUACAGUGUUGCCUuguggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagccuagagagcg
.((((((..(((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))..))))))..

Structure

-c      uu     --c    U  U           C   u   a 
  uucucu  gcuuu   AGCU CU UACAGUGUUGC Uug ggc u
  ||||||  |||||   |||| || ||||||||||| ||| ||| g
  gagaga  cgaaa   UCGG GA AUGUUACGACG Aac uug g
gc      uc     CUA    -  C           -   -   a 

Annotation confidence High

Genome context

Ultra12: 966231-966319 [-]

Mature oan-miR-107-5p

• Accession: MIMAT0007118
• Description: Ornithorhynchus anatinus oan-miR-107-5p mature miRNA
• Sequence: 16 - AGCUUCUUUACAGUGUUGCCU - 36
• Evidence: experimental ; Illumina [1]

Mature oan-miR-107-3p

• Accession: MIMAT0007119
• Description: Ornithorhynchus anatinus oan-miR-107-3p mature miRNA
• Sequence: 53 - AGCAGCAUUGUACAGGGCUAUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004