Stem-loop oan-mir-126

Accession

MI0006861

Description

Ornithorhynchus anatinus oan-mir-126 precursor miRNA

Sequence

362038 reads, 8235 reads per million, 5 experiments

gaagcaucagugacagcuggcaacugccCAUUAUUACUUUUGGUACGCGcugugacgcuucaaacUCGUACCGUGAGUAAUAAUGCGuggcuggcagcacuggcagcgcc
...((.(((((....((((.((.((((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).)))).)).)))))))))..))...

Structure

gaa  -a     gaca    g  a    c           U       CGcug   c 
   gc  ucagu    gcug ca cugc CAUUAUUACUU UGGUACG     uga g
   ||  |||||    |||| || |||| ||||||||||| |||||||     |||  
   cg  gguca    cgac gu gguG GUAAUAAUGAG GCCAUGC     acu c
ccg  ac     ----    g  c    C           U       -Ucaa   u 

Annotation confidence High

Genome context

Ultra157: 304102-304211 [-]

Mature oan-miR-126-5p

• Accession: MIMAT0007125
• Description: Ornithorhynchus anatinus oan-miR-126-5p mature miRNA
• Sequence: 29 - CAUUAUUACUUUUGGUACGCG - 49
• Evidence: experimental ; Illumina [1]

Mature oan-miR-126-3p

• Accession: MIMAT0007126
• Description: Ornithorhynchus anatinus oan-miR-126-3p mature miRNA
• Sequence: 66 - UCGUACCGUGAGUAAUAAUGCG - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004