Stem-loop gga-mir-1553

Accession

MI0007278

Description

Gallus gallus gga-mir-1553 precursor miRNA

Sequence

4 reads, 0 reads per million, 1 experiments

gaggaccaguuggcagcucucacacAGUCCUGUCCUGUCUACCUACUGUcuguccuguccUGUGGUGGGAGGACAGUGAUGUgggagagggccacuuucagcuuu
(..((..(((.(((..(((((.((((.(((((((((.((((((.((.(.(......).)..))))))))))))))).)))))).))))).)))))).))..)...

Structure

--- ag  cc   u   ag     a    G  -       G      U  -U U ug 
   g  ga  agu ggc  cucuc cacA UC CUGUCCU UCUACC AC  G c  u
   |  ||  ||| |||  ||||| |||| || ||||||| |||||| ||  | |   
   c  cu  uca ccg  gagag gUGU AG GACAGGA GGGUGG UG  c g  c
uuu ga  -u   -   -g     g    -  U       -      -  Uc u uc 

Annotation confidence Not enough data

Genome context

chr7: 23871794-23871898 [+]

Mature gga-miR-1553-5p

• Accession: MIMAT0007409
• Description: Gallus gallus gga-miR-1553-5p mature miRNA
• Sequence: 26 - AGUCCUGUCCUGUCUACCUACUGU - 49
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1553-3p

• Accession: MIMAT0007410
• Description: Gallus gallus gga-miR-1553-3p mature miRNA
• Sequence: 61 - UGUGGUGGGAGGACAGUGAUGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964