miRBase entry: mml-mir-409

Stem-loop mml-mir-409

Accession

MI0007733

Description

Macaca mulatta mml-mir-409 precursor miRNA

Literature search

1 open access papers mention mml-mir-409
(2 sentences)

Sequence

10138 reads, 83 reads per million, 9 experiments

ugguacucggggagAGGUUACCCGAGCAACUUUGCAUcuggacgacGAAUGUUGCUCGGUGAACCCCUuuucgguauca
((((((.(((((((.((((..((((((((((((((........).)))).)))))))))..)))).)))))))))))))

Structure

      u       A    AC         -    - AUc 
ugguac cggggag GGUU  CCGAGCAAC UUUG C   u
|||||| ||||||| ||||  ||||||||| |||| |    
acuaug gcuuuUC CCAA  GGCUCGUUG AAGc g   g
      -       C    GU         U    a cag

Annotation confidence High

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Genome context

chr7: 163399096-163399174 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mml-mir-409

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-409-5p

Accession	MIMAT0006314
Description	Macaca mulatta mml-miR-409-5p mature miRNA
Sequence	15 - AGGUUACCCGAGCAACUUUGCAU - 37
Evidence	not_experimental
Database links
Predicted targets

Mature mml-miR-409-3p

Accession	MIMAT0006315
Description	Macaca mulatta mml-miR-409-3p mature miRNA
Sequence	47 - GAAUGUUGCUCGGUGAACCCCU - 68
Evidence	not_experimental
Database links
Predicted targets

References

PubMed ID: 18186931
Identification of novel homologous microRNA genes in the rhesus macaque genome
Yue J, Sheng Y, Orwig KE
BMC Genomics (2008) 9:8