Stem-loop mml-mir-654

Accession

MI0007898

Description

Macaca mulatta mml-mir-654 precursor miRNA mir-654

Gene
family

RF01922; mir-654

Literature search

1 open access papers mention mml-mir-654
(3 sentences)

Sequence

3648 reads, 27 reads per million, 9 experiments

ggguaaguggaaagaUGGUGGGCCGCAGAACAUGUGCugaguucgugccaUAUGUCUGCUGACCAUCACCUUuagaagccc
((((......((((.((((((.(.(((((.(((((((.........).))))))))))).).)))))).))))....))))

Structure

    aagugg    a      G C     A      - uga 
gggu      aaag UGGUGG C GCAGA CAUGUG C   g
||||      |||| |||||| | ||||| |||||| |   u
cccg      uUUC ACUACC G CGUCU GUAUac g   u
    --aaga    C      A U     -      c ugc 

Annotation confidence High

Genome context

chr7: 163374225-163374305 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mml-mir-654

Mature mml-miR-654-5p

• Accession: MIMAT0006495
• Description: Macaca mulatta mml-miR-654-5p mature miRNA
• Sequence: 16 - UGGUGGGCCGCAGAACAUGUGC - 37
• Evidence: not_experimental

Mature mml-miR-654-3p

• Accession: MIMAT0006496
• Description: Macaca mulatta mml-miR-654-3p mature miRNA
• Sequence: 51 - UAUGUCUGCUGACCAUCACCUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8