Stem-loop mml-mir-660

Accession

MI0007901

Description

Macaca mulatta mml-mir-660 precursor miRNA mir-660

Gene
family

RF04285; mir-660

Sequence

4673 reads, 54 reads per million, 9 experiments

cugcuccuucucccaUACCCAUUGCAUAUCGGAGUUGuaaauucucaaaacACCUCCUGUGUGCAUGGAUUACaggagggugagccuugucaucgug
..((((.((((((.....((((.((((((.((((.(((...........))).)))).))))))))))......)))))).))))............

Structure

----------cu    c      -caUAC    U      C    U   aaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      GGUA CGUGUG CCUC Aca    u
gugcuacuguuc    u      aCAUUA    -      U    C   aaac 

Annotation confidence Not enough data

Genome context

chrX: 50020567-50020663 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-660

Mature mml-miR-660-5p

• Accession: MIMAT0006499
• Description: Macaca mulatta mml-miR-660-5p mature miRNA
• Sequence: 16 - UACCCAUUGCAUAUCGGAGUUG - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-660-3p

• Accession: MIMAT0026907
• Description: Macaca mulatta mml-miR-660-3p mature miRNA
• Sequence: 52 - ACCUCCUGUGUGCAUGGAUUAC - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45