miRBase entry: cfa-mir-191

Stem-loop cfa-mir-191

Accession

MI0008037

Description

Canis familiaris cfa-mir-191 precursor miRNA

Sequence

CAACGGAAUCCCAAAAGCAGCUguugucuccagagcauuccagcugcgcuuggauuucguuccc
.((((((((((.((..(((((((.(((.......)))...)))))))..))))))))))))...

Structure

--C          C  AA       --u   cu 
   AACGGAAUCC AA  GCAGCUg   ugu  c
   |||||||||| ||  |||||||   |||  c
   uugcuuuagg uu  cgucgac   acg  a
ccc          -  cg       cuu   ag

Annotation confidence Not enough data

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Genome context

chr20: 40144135-40144198 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-191

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-191

Accession	MIMAT0006638
Description	Canis familiaris cfa-miR-191 mature miRNA
Sequence	1 - CAACGGAAUCCCAAAAGCAGCU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415