miRBase entry: cfa-mir-127

Stem-loop cfa-mir-127

Accession

MI0008132

Description

Canis familiaris cfa-mir-127 precursor miRNA

Sequence

ccugcugaagcucagagggcucugauucagaaagaucaUCGGAUCCGUCUGAGCUUGGCU
...(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).

Structure

ccu   g         g  c      --  a 
   gcu aagcucaga gg ucugau  uc g
   ||| ||||||||| || ||||||  || a
   CGG UUCGAGUCU CC AGGCUa  ag a
--U   -         G  U      cu  a

Annotation confidence Not enough data

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Genome context

chr8: 69104938-69104997 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-127

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-127

Accession	MIMAT0006713
Description	Canis familiaris cfa-miR-127 mature miRNA
Sequence	39 - UCGGAUCCGUCUGAGCUUGGCU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415