miRBase entry: cfa-mir-376a-1

Stem-loop cfa-mir-376a-1

Accession

MI0008143

Description

Canis familiaris cfa-mir-376a-1 precursor miRNA

Sequence

guagauucuccuucuaugaguacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.((((((...(((.....))).....)))))))))).)))).))..

Structure

--  a    c    u      --gua   u 
  gu gauu uccu cuauga     cau a
  || |||| |||| ||||||     ||| u
  CA CUAA AGGA GAUACU     gua u
UG  C    A    -      Aauua   u

Annotation confidence Not enough data

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Genome context

chr8: 69271259-69271316 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cfa-mir-376a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-376a

Accession	MIMAT0006722
Description	Canis familiaris cfa-miR-376a mature miRNA
Sequence	38 - AUCAUAGAGGAAAAUCCACGU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415