miRBase entry: cfa-mir-382

Stem-loop cfa-mir-382

Accession

MI0008145

Description

Canis familiaris cfa-mir-382 precursor miRNA

Sequence

aaguuguucgugguggauucgcuuuacuuaugacgAAUCAUUCACGGACAACACUUU
..(((((((((((..(((((((.........).))))))..))))))))))).....

Structure

---aa           ug      - uuu 
     guuguucgugg  gauucg c   a
     |||||||||||  |||||| |   c
     CAACAGGCACU  CUAAgc g   u
UUUCA           UA      a uau

Annotation confidence Not enough data

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Genome context

chr8: 69283123-69283179 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cfa-mir-382

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-382

Accession	MIMAT0006724
Description	Canis familiaris cfa-miR-382 mature miRNA
Sequence	36 - AAUCAUUCACGGACAACACUUU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415