miRBase entry: cfa-mir-92a-2

Stem-loop cfa-mir-92a-2

Accession

MI0008175

Description

Canis familiaris cfa-mir-92a-2 precursor miRNA

Sequence

ggguggggauuuguggcauuacuuguguuccauauaaagUAUUGCACUUGUCCCGGCCUGU
((((.(((((..(((.((.(((((((((...)))).))))).)))))..))))).))))..

Structure

--    g     uu   g  u     -    u 
  gggu gggau  gug ca uacuu gugu  
  |||| |||||  ||| || ||||| |||| c
  UCCG CCCUG  CAC GU AUgaa uaua  
UG    G     UU   -  U     a    c

Annotation confidence Not enough data

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Genome context

chrX: 104895826-104895886 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-92a

Accession	MIMAT0006653
Description	Canis familiaris cfa-miR-92a mature miRNA
Sequence	40 - UAUUGCACUUGUCCCGGCCUGU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415