miRBase entry: dan-mir-281-2

Stem-loop dan-mir-281-2

Accession

MI0008965

Description

Drosophila ananassae dan-mir-281-2 precursor miRNA

Sequence

cgaauagugaaaugAAGAGAGCUAUCCGUCGACAGUcaaguuaaaacacggauuguaauacUGUCAUGGAAUUGCUCUCUUUGUauaacauucg
(((((.((...(((((((((((..(((((.((((((..((((........)))).....)))))))))))...)))))))))))...)))))))

Structure

     a  gaa           -UA     C      ---ca    aaa 
cgaau gu   augAAGAGAGC   UCCGU GACAGU     aguu   a
||||| ||   |||||||||||   ||||| ||||||     ||||    
gcuua ca   UGUUUCUCUCG   AGGUA CUGUca     uuag   c
     -  aua           UUA     -      uaaug    gca

Annotation confidence Not enough data

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Genome context

scaffold_13266: 2568938-2569031 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dan-mir-281-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-281-2-5p

Accession	MIMAT0009182
Description	Drosophila ananassae dan-miR-281-2-5p mature miRNA
Sequence	15 - AAGAGAGCUAUCCGUCGACAGU - 36
Evidence	not_experimental

Mature dan-miR-281-3p

Accession	MIMAT0008429
Description	Drosophila ananassae dan-miR-281-3p mature miRNA
Sequence	62 - UGUCAUGGAAUUGCUCUCUUUGU - 84
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218