Stem-loop bta-mir-615

Accession

MI0009877

Description

Bos taurus bta-mir-615 precursor miRNA

Literature search

3 open access papers mention bta-mir-615
(5 sentences)

Sequence

998 reads, 25 reads per million, 65 experiments

cucgggaggggcgggagGGGGGUCCCCGGUGCUCGGAUCucgagggugcuuauuguucgguccgagccugggucucccucuccccccaccccc
...(((..(((.((((((((((..(((((.((((((((..((((.(.......).)))))))))))))))))..)))))))))))))..))).

Structure

cuc   ag   c          UC     U        Cu    g ug 
   ggg  ggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
   |||  ||| ||||||||||  ||||| ||||||||  |||| |  u
   ccc  ccc cccucucccu  ggguc cgagccug  gcuu u  u
--c   ca   -          cu     -        --    g ua 

Annotation confidence High

Genome context

chr5: 26204589-26204681 [-]

Mature bta-miR-615

• Accession: MIMAT0009355
• Description: Bos taurus bta-miR-615 mature miRNA
• Sequence: 18 - GGGGGUCCCCGGUGCUCGGAUC - 39
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125