miRBase entry: cfa-mir-18b

Stem-loop cfa-mir-18b

Accession

MI0010323

Description

Canis familiaris cfa-mir-18b precursor miRNA

Sequence

ccuguguUAAGGUGCAUCUAGUGCAGUUAgugaagccgcuuagaaccuacugcccuaaaugccccuuccggcacagg
((((((((((((.((((.(((.(((((..((.............))..))))).))).)))).))))..))))))))

Structure

        --    U    C   U     UA  gaagc 
ccuguguU  AAGG GCAU UAG GCAGU  gu     c
||||||||  |||| |||| ||| |||||  ||     g
ggacacgg  uucc cgua auc cguca  ca     c
        cc    c    a   c     uc  agauu

Annotation confidence Not enough data

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Genome context

chrX: 104896339-104896415 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-18b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-18b

Accession	MIMAT0009831
Description	Canis familiaris cfa-miR-18b mature miRNA
Sequence	8 - UAAGGUGCAUCUAGUGCAGUUA - 29
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39