miRBase entry: cfa-let-7b

Stem-loop cfa-let-7b

Accession

MI0010329

Description

Canis familiaris cfa-let-7b precursor miRNA

Sequence

cggggUGAGGUAGUAGGUUGUGUGGUUucagggcagugauguugcccccucggaagauaacuauacaaccuacugccuuccccga
(((((.(((((((((((((((((((((((.((((((.....))))))(....)..)).)))))))))))))))))))))))))).

Structure

-     U                     -  -------a      u 
 cgggg GAGGUAGUAGGUUGUGUGGUU uc        gggcag g
 ||||| ||||||||||||||||||||| ||        |||||| a
 gcccc uuccgucauccaacauaucaa ag        cccguu u
a     -                     u  aaggcucc      g

Annotation confidence Not enough data

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Genome context

chr10: 20033388-20033472 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-let-7b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-let-7b

Accession	MIMAT0009836
Description	Canis familiaris cfa-let-7b mature miRNA
Sequence	6 - UGAGGUAGUAGGUUGUGUGGUU - 27
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39